Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Mup-ps10-201ENSMUST00000119626 556 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Gm11852-201ENSMUST00000120806 222 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.84□□□□□ -1.31
Sox9Q04887 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.84□□□□□ -1.31
Sox9Q04887 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox9Q04887 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC6.84□□□□□ -1.31
Sox9Q04887 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox9Q04887 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Sox9Q04887 Gm25065-201ENSMUST00000177914 132 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Gm6472-201ENSMUST00000178147 651 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Gm25891-201ENSMUST00000180050 132 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Mir7028-201ENSMUST00000185016 64 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox9Q04887 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox9Q04887 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox9Q04887 Gm28688-201ENSMUST00000187301 268 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.84□□□□□ -1.31
Sox9Q04887 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox9Q04887 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Gm17824-201ENSMUST00000197690 805 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.84□□□□□ -1.31
Sox9Q04887 Gm42886-201ENSMUST00000199214 466 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Gm2996-201ENSMUST00000211398 537 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.84□□□□□ -1.31
Sox9Q04887 Gm9535-201ENSMUST00000218499 768 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Gm9110-201ENSMUST00000219035 617 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Sox9Q04887 AC168880.1-201ENSMUST00000225113 707 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox9Q04887 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Sox9Q04887 Gm22575-201ENSMUST00000082981 110 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Sox9Q04887 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Sox9Q04887 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Sox9Q04887 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Sox9Q04887 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.84□□□□□ -1.31
Sox9Q04887 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Sox9Q04887 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox9Q04887 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox9Q04887 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox9Q04887 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Sox9Q04887 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox9Q04887 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC6.83□□□□□ -1.32
Sox9Q04887 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC6.83□□□□□ -1.32
Sox9Q04887 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox9Q04887 Gm15186-201ENSMUST00000119345 563 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm8317-201ENSMUST00000121261 471 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm15057-201ENSMUST00000121516 534 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm16248-201ENSMUST00000124238 243 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm25722-201ENSMUST00000157498 279 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm9597-201ENSMUST00000171913 602 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm27355-201ENSMUST00000185045 128 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm18728-201ENSMUST00000186155 753 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm2325-201ENSMUST00000186637 581 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm6137-201ENSMUST00000187552 578 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm8009-201ENSMUST00000191672 436 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC6.83□□□□□ -1.32
Sox9Q04887 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm43235-201ENSMUST00000200121 297 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm44111-201ENSMUST00000204649 399 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm44833-201ENSMUST00000208368 331 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox9Q04887 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Gm45551-201ENSMUST00000211459 928 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.83□□□□□ -1.32
Sox9Q04887 Gm45789-201ENSMUST00000213038 364 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Gm46192-201ENSMUST00000217894 326 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.83□□□□□ -1.32
Sox9Q04887 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Sox9Q04887 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Sox9Q04887 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms