Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col8a1Q00780 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col8a1Q00780 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm44116-201ENSMUST00000204269 1525 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm42969-201ENSMUST00000199858 3631 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm18493-201ENSMUST00000192084 1612 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm13771-201ENSMUST00000117988 238 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm15750-201ENSMUST00000120970 616 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm13642-201ENSMUST00000121697 381 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm21894-201ENSMUST00000179631 546 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm8669-201ENSMUST00000183839 945 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm28377-201ENSMUST00000189695 720 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm17967-201ENSMUST00000195319 647 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm5694-201ENSMUST00000195648 641 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm43089-201ENSMUST00000199162 275 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm42976-201ENSMUST00000200313 222 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm43945-201ENSMUST00000203595 754 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm44088-201ENSMUST00000204595 237 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm45269-201ENSMUST00000210359 282 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC5.9□□□□□ -1.46
Col8a1Q00780 AC150661.1-201ENSMUST00000222563 495 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
Col8a1Q00780 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.9□□□□□ -1.46
Col8a1Q00780 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col8a1Q00780 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col8a1Q00780 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col8a1Q00780 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col8a1Q00780 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col8a1Q00780 Gm37790-201ENSMUST00000193136 3346 ntBASIC5.9□□□□□ -1.47
Col8a1Q00780 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC5.9□□□□□ -1.47
Col8a1Q00780 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.9□□□□□ -1.47
Col8a1Q00780 Gm6011-201ENSMUST00000211736 1796 ntBASIC5.9□□□□□ -1.47
Col8a1Q00780 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Col8a1Q00780 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Col8a1Q00780 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col8a1Q00780 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col8a1Q00780 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Col8a1Q00780 Gm37783-201ENSMUST00000192025 1856 ntBASIC5.9□□□□□ -1.47
Col8a1Q00780 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Col8a1Q00780 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Col8a1Q00780 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col8a1Q00780 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Col8a1Q00780 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.89□□□□□ -1.47
Col8a1Q00780 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC5.89□□□□□ -1.47
Col8a1Q00780 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col8a1Q00780 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms