Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm9506-201ENSMUST00000118516 320 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Scn1bP97952 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC5.57□□□□□ -1.52
Scn1bP97952 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Scn1bP97952 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC5.57□□□□□ -1.52
Scn1bP97952 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Scn1bP97952 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Scn1bP97952 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Scn1bP97952 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.57□□□□□ -1.52
Scn1bP97952 Gm4322-201ENSMUST00000191094 336 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Gm7512-201ENSMUST00000195217 1170 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Scn1bP97952 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Gm17822-201ENSMUST00000204307 351 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Scn1bP97952 Gm4574-201ENSMUST00000207804 542 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.57□□□□□ -1.52
Scn1bP97952 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.57□□□□□ -1.52
Scn1bP97952 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Gm18040-201ENSMUST00000217922 827 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Gm2398-201ENSMUST00000218347 883 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC5.57□□□□□ -1.52
Scn1bP97952 AC154558.1-201ENSMUST00000222278 415 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Gm18247-201ENSMUST00000222937 601 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Scn1bP97952 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Scn1bP97952 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Scn1bP97952 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Scn1bP97952 Gm24621-201ENSMUST00000082679 140 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Scn1bP97952 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Scn1bP97952 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Scn1bP97952 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Scn1bP97952 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.57□□□□□ -1.52
Scn1bP97952 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.57□□□□□ -1.52
Scn1bP97952 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Scn1bP97952 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Scn1bP97952 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Scn1bP97952 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Scn1bP97952 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Scn1bP97952 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Scn1bP97952 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Scn1bP97952 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Scn1bP97952 Gm12468-201ENSMUST00000116189 404 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm13193-201ENSMUST00000117275 225 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm11858-201ENSMUST00000117935 838 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm6142-201ENSMUST00000120290 325 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Scn1bP97952 Gm14876-201ENSMUST00000120795 327 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm13808-201ENSMUST00000121353 184 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.56□□□□□ -1.52
Scn1bP97952 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm23069-201ENSMUST00000158240 311 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC5.56□□□□□ -1.52
Scn1bP97952 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Gm3344-201ENSMUST00000169610 603 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Scn1bP97952 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.56□□□□□ -1.52
Scn1bP97952 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC5.56□□□□□ -1.52
Scn1bP97952 Gm9114-201ENSMUST00000188558 997 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Ighv1-17-201ENSMUST00000194435 350 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm44319-201ENSMUST00000196974 93 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm5853-201ENSMUST00000197183 632 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC5.56□□□□□ -1.52
Scn1bP97952 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC5.56□□□□□ -1.52
Scn1bP97952 AC153152.2-201ENSMUST00000223165 959 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Gm2754-201ENSMUST00000223383 589 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 CT009515.1-201ENSMUST00000228127 586 ntBASIC5.56□□□□□ -1.52
Scn1bP97952 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Scn1bP97952 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Scn1bP97952 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Scn1bP97952 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Scn1bP97952 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scn1bP97952 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms