Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
H3f3aP84244 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
H3f3aP84244 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Gm22371-201ENSMUST00000104588 130 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm8317-201ENSMUST00000121261 471 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.36□□□□□ -1.55
H3f3aP84244 Gm23903-201ENSMUST00000157566 131 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm23757-201ENSMUST00000158353 100 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm23386-201ENSMUST00000158585 144 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm24179-201ENSMUST00000158925 127 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
H3f3aP84244 Gm20480-201ENSMUST00000173953 250 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm25065-201ENSMUST00000177914 132 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm25891-201ENSMUST00000180050 132 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Gm5430-201ENSMUST00000182525 915 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Mir6992-201ENSMUST00000183342 109 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Mir6989-201ENSMUST00000184812 65 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.36□□□□□ -1.55
H3f3aP84244 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm31211-201ENSMUST00000199170 253 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Gm44251-201ENSMUST00000204963 442 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC5.36□□□□□ -1.55
H3f3aP84244 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
H3f3aP84244 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
H3f3aP84244 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
H3f3aP84244 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.36□□□□□ -1.55
H3f3aP84244 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
H3f3aP84244 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
H3f3aP84244 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
H3f3aP84244 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
H3f3aP84244 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
H3f3aP84244 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
H3f3aP84244 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3f3aP84244 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.36□□□□□ -1.55
H3f3aP84244 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.35□□□□□ -1.55
H3f3aP84244 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
H3f3aP84244 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
H3f3aP84244 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
H3f3aP84244 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Gm24434-201ENSMUST00000104081 132 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Gm11990-201ENSMUST00000121505 897 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Gm15300-201ENSMUST00000122324 279 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
H3f3aP84244 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
H3f3aP84244 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Gm6631-201ENSMUST00000193699 559 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Gm37358-201ENSMUST00000195492 479 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Gm44382-201ENSMUST00000198683 122 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.35□□□□□ -1.55
H3f3aP84244 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.35□□□□□ -1.55
H3f3aP84244 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
H3f3aP84244 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
H3f3aP84244 Gm25515-201ENSMUST00000083858 157 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Gm10540-201ENSMUST00000097581 276 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3f3aP84244 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.35□□□□□ -1.55
H3f3aP84244 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms