Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.21□□□□□ -1.26
Hmgb1P63158 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm24680-201ENSMUST00000158759 126 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.21□□□□□ -1.26
Hmgb1P63158 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm19200-201ENSMUST00000182579 1001 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm29534-201ENSMUST00000187328 382 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm9114-201ENSMUST00000188558 997 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm37193-201ENSMUST00000193087 513 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm29781-201ENSMUST00000203862 478 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm44940-201ENSMUST00000206225 1247 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.21□□□□□ -1.26
Hmgb1P63158 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
Hmgb1P63158 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Hmgb1P63158 AC164550.1-201ENSMUST00000217821 1066 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Hmgb1P63158 AC124450.1-201ENSMUST00000225569 495 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 AC133958.1-201ENSMUST00000227085 961 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Hmgb1P63158 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Hmgb1P63158 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Hmgb1P63158 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm45172-201ENSMUST00000206054 1301 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Hmgb1P63158 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm2987-201ENSMUST00000187673 1693 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm19368-201ENSMUST00000221258 4424 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm24173-201ENSMUST00000104130 128 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm12152-201ENSMUST00000122465 684 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm22235-201ENSMUST00000157085 110 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm2976-201ENSMUST00000160362 513 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Hmgb1P63158 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm27360-201ENSMUST00000183487 80 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Mir6348-201ENSMUST00000183804 120 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm8506-201ENSMUST00000186661 829 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm29281-201ENSMUST00000188077 381 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm29525-201ENSMUST00000189844 699 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm29141-201ENSMUST00000190357 882 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm29552-201ENSMUST00000190548 660 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm29523-201ENSMUST00000191415 699 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm2429-201ENSMUST00000194635 586 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm44665-201ENSMUST00000205381 251 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC7.2□□□□□ -1.26
Hmgb1P63158 AC151907.1-201ENSMUST00000228812 412 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm5446-201ENSMUST00000091762 784 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Hmgb1P63158 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm15394-201ENSMUST00000119656 1308 ntBASIC7.2□□□□□ -1.26
Hmgb1P63158 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Hmgb1P63158 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Hmgb1P63158 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms