Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm28665-201ENSMUST00000189269 670 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Gm38384-201ENSMUST00000195413 1122 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.32□□□□□ -1.4
Atxn1P54254 Gm43724-201ENSMUST00000197516 226 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Atxn1P54254 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Atxn1P54254 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.32□□□□□ -1.4
Atxn1P54254 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.32□□□□□ -1.4
Atxn1P54254 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Atxn1P54254 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 AC165437.1-201ENSMUST00000228640 536 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Mir27a-201ENSMUST00000083510 87 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Gm25515-201ENSMUST00000083858 157 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Atxn1P54254 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Atxn1P54254 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Atxn1P54254 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.32□□□□□ -1.4
Atxn1P54254 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Atxn1P54254 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Atxn1P54254 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Atxn1P54254 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm42455-201ENSMUST00000199761 2736 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm7146-201ENSMUST00000116079 739 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Gm13455-201ENSMUST00000118767 517 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Gm8317-201ENSMUST00000121261 471 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm22764-201ENSMUST00000158370 92 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Gm25717-201ENSMUST00000158631 353 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.31□□□□□ -1.4
Atxn1P54254 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm46223-201ENSMUST00000215196 675 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Gm7802-201ENSMUST00000216464 262 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Gm9535-201ENSMUST00000218499 768 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 AC154583.1-201ENSMUST00000224788 655 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Atxn1P54254 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Atxn1P54254 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm22005-201ENSMUST00000082795 141 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Atxn1P54254 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC6.31□□□□□ -1.4
Atxn1P54254 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Atxn1P54254 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.31□□□□□ -1.4
Atxn1P54254 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Atxn1P54254 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.3□□□□□ -1.4
Atxn1P54254 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Atxn1P54254 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Atxn1P54254 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Atxn1P54254 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms