Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.69□□□□□ -1.34
Shmt1P50431 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm17048-201ENSMUST00000179266 847 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm37784-201ENSMUST00000193233 189 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.69□□□□□ -1.34
Shmt1P50431 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC6.69□□□□□ -1.34
Shmt1P50431 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.69□□□□□ -1.34
Shmt1P50431 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 AC132833.3-201ENSMUST00000227472 866 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 AC154419.1-201ENSMUST00000227627 272 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 AC125464.1-201ENSMUST00000228013 512 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Shmt1P50431 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Shmt1P50431 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
Shmt1P50431 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.69□□□□□ -1.34
Shmt1P50431 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Shmt1P50431 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Shmt1P50431 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
Shmt1P50431 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
Shmt1P50431 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Gm13772-201ENSMUST00000118431 317 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Shmt1P50431 Gm14294-201ENSMUST00000119749 751 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Gm26410-201ENSMUST00000157670 261 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Gm25653-201ENSMUST00000158473 138 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Mir7072-201ENSMUST00000184542 60 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Gm27653-201ENSMUST00000185037 136 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Shmt1P50431 Gm28527-201ENSMUST00000185210 297 ntBASIC6.68□□□□□ -1.34
Shmt1P50431 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 160.6 ms