Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.43□□□□□ -1.54
Rfx3P48381 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Rfx3P48381 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.43□□□□□ -1.54
Rfx3P48381 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.43□□□□□ -1.54
Rfx3P48381 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.43□□□□□ -1.54
Rfx3P48381 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.43□□□□□ -1.54
Rfx3P48381 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.43□□□□□ -1.54
Rfx3P48381 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.43□□□□□ -1.54
Rfx3P48381 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.43□□□□□ -1.54
Rfx3P48381 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Rfx3P48381 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Rfx3P48381 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
Rfx3P48381 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
Rfx3P48381 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.43□□□□□ -1.54
Rfx3P48381 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Rfx3P48381 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Rfx3P48381 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Rfx3P48381 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Rfx3P48381 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Rfx3P48381 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.43□□□□□ -1.54
Rfx3P48381 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.42□□□□□ -1.54
Rfx3P48381 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Rfx3P48381 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Rfx3P48381 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Rfx3P48381 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Gm15696-201ENSMUST00000121730 445 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Mir1903-201ENSMUST00000122574 80 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm23553-201ENSMUST00000157817 295 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm5947-201ENSMUST00000179156 714 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Gm5645-201ENSMUST00000179597 714 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Gm3544-201ENSMUST00000196129 305 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm5306-201ENSMUST00000203325 757 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm45448-201ENSMUST00000211739 209 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.42□□□□□ -1.54
Rfx3P48381 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Rfx3P48381 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Gm22581-201ENSMUST00000083735 136 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Rfx3P48381 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Rfx3P48381 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Rfx3P48381 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.42□□□□□ -1.54
Rfx3P48381 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Rfx3P48381 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Rfx3P48381 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Rfx3P48381 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Rfx3P48381 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Rfx3P48381 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC5.41□□□□□ -1.54
Rfx3P48381 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Rfx3P48381 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Rfx3P48381 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.41□□□□□ -1.54
Rfx3P48381 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rfx3P48381 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Rfx3P48381 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.41□□□□□ -1.54
Rfx3P48381 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Rfx3P48381 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.41□□□□□ -1.54
Rfx3P48381 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Rfx3P48381 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Rfx3P48381 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Rfx3P48381 Gm22714-201ENSMUST00000116894 78 ntBASIC5.41□□□□□ -1.54
Rfx3P48381 Gm12439-201ENSMUST00000117162 365 ntBASIC5.41□□□□□ -1.54
Rfx3P48381 Gm12677-201ENSMUST00000118668 426 ntBASIC5.41□□□□□ -1.54
Rfx3P48381 Gm23430-201ENSMUST00000122490 314 ntBASIC5.41□□□□□ -1.54
Rfx3P48381 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.41□□□□□ -1.54
Rfx3P48381 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC5.41□□□□□ -1.54
Rfx3P48381 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Rfx3P48381 Gm14747-201ENSMUST00000149888 984 ntBASIC5.41□□□□□ -1.54
Rfx3P48381 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Rfx3P48381 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Rfx3P48381 Gm27006-201ENSMUST00000182218 943 ntBASIC5.41□□□□□ -1.54
Rfx3P48381 Gm27037-201ENSMUST00000182270 960 ntBASIC5.41□□□□□ -1.54
Rfx3P48381 Gm5260-201ENSMUST00000186157 949 ntBASIC5.41□□□□□ -1.54
Rfx3P48381 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.41□□□□□ -1.54
Rfx3P48381 Gm29489-201ENSMUST00000188934 324 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms