Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Sox18P43680 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.43□□□□□ -1.22
Sox18P43680 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Sox18P43680 Mir6340-201ENSMUST00000183857 119 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.43□□□□□ -1.22
Sox18P43680 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC7.43□□□□□ -1.22
Sox18P43680 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Sox18P43680 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Sox18P43680 Gm4501-201ENSMUST00000207330 551 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Gm4558-201ENSMUST00000207886 521 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Gm4528-201ENSMUST00000207905 551 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Gm45530-201ENSMUST00000211658 225 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Sox18P43680 Gm18891-201ENSMUST00000216734 1087 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Gm33778-201ENSMUST00000216884 704 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC7.43□□□□□ -1.22
Sox18P43680 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Sox18P43680 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Sox18P43680 Gm5182-201ENSMUST00000217708 6092 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Gm39041-201ENSMUST00000205557 3902 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Gm43121-201ENSMUST00000199065 1305 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Sox18P43680 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Sox18P43680 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Sox18P43680 AW822252-205ENSMUST00000192662 1352 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Gm17229-202ENSMUST00000166792 1753 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Sox18P43680 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Sox18P43680 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Sox18P43680 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Sox18P43680 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Sox18P43680 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC7.43□□□□□ -1.22
Sox18P43680 Gm44013-201ENSMUST00000204392 2262 ntBASIC7.43□□□□□ -1.22
Sox18P43680 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Sox18P43680 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Sox18P43680 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Sox18P43680 Gm44288-201ENSMUST00000205061 2795 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm42519-201ENSMUST00000199282 3656 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 AC107232.1-201ENSMUST00000227785 1503 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.42□□□□□ -1.22
Sox18P43680 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Sox18P43680 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
Sox18P43680 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
Sox18P43680 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Gm42595-201ENSMUST00000196771 1607 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Gm13854-201ENSMUST00000121183 1679 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.42□□□□□ -1.22
Sox18P43680 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Sox18P43680 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Sox18P43680 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Sox18P43680 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Sox18P43680 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Sox18P43680 Gm36962-201ENSMUST00000192114 1761 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Sox18P43680 Gm22438-201ENSMUST00000104049 132 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Gm24195-201ENSMUST00000116804 137 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm5601-201ENSMUST00000118909 972 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm13603-201ENSMUST00000119404 83 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm6587-201ENSMUST00000120219 613 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC7.42□□□□□ -1.22
Sox18P43680 Gm5924-201ENSMUST00000132554 871 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm26184-201ENSMUST00000157686 131 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Sox18P43680 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Sox18P43680 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Sox18P43680 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Sox18P43680 Pea15b-201ENSMUST00000182806 387 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm18342-201ENSMUST00000186987 694 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm29362-201ENSMUST00000187898 133 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm2427-201ENSMUST00000189121 881 ntBASIC7.42□□□□□ -1.22
Sox18P43680 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Gm43471-201ENSMUST00000197550 467 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm44403-201ENSMUST00000198554 129 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm44162-201ENSMUST00000203543 544 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sox18P43680 Gm9278-201ENSMUST00000205508 553 ntBASIC7.42□□□□□ -1.22
Sox18P43680 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm19140-201ENSMUST00000209790 421 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.42□□□□□ -1.22
Sox18P43680 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.42□□□□□ -1.22
Sox18P43680 AC153548.2-201ENSMUST00000219770 885 ntBASIC7.42□□□□□ -1.22
Sox18P43680 AC138667.2-201ENSMUST00000224880 598 ntBASIC7.42□□□□□ -1.22
Sox18P43680 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.42□□□□□ -1.22
Sox18P43680 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms