Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC211878.2-201ENSMUST00000222486 488 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 AC154527.3-201ENSMUST00000225519 989 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 AC115357.1-201ENSMUST00000227575 466 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col18a1P39061 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Col18a1P39061 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Col18a1P39061 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col18a1P39061 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col18a1P39061 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Col18a1P39061 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Col18a1P39061 Gm16270-201ENSMUST00000160327 3238 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col18a1P39061 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col18a1P39061 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col18a1P39061 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
Col18a1P39061 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Col18a1P39061 Gm9429-201ENSMUST00000117804 868 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm2288-201ENSMUST00000118560 638 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm2318-201ENSMUST00000119623 639 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm13341-201ENSMUST00000120780 672 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm12181-201ENSMUST00000121448 531 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC8.13□□□□□ -1.11
Col18a1P39061 Gm7438-201ENSMUST00000177664 639 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm7408-201ENSMUST00000178014 639 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm7386-201ENSMUST00000178020 639 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm3657-201ENSMUST00000178170 639 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm7415-201ENSMUST00000178205 639 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm7398-201ENSMUST00000178589 639 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm7391-201ENSMUST00000178680 639 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm7375-201ENSMUST00000179232 639 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm3681-201ENSMUST00000179940 639 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm27543-201ENSMUST00000183562 177 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Vis1-201ENSMUST00000183957 201 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm8480-201ENSMUST00000190350 698 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC8.13□□□□□ -1.11
Col18a1P39061 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Col18a1P39061 Gm23459-201ENSMUST00000083259 131 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC8.13□□□□□ -1.11
Col18a1P39061 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Gm45457-201ENSMUST00000209931 3089 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col18a1P39061 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Gm45885-202ENSMUST00000211520 1383 ntBASIC8.13□□□□□ -1.11
Col18a1P39061 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col18a1P39061 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col18a1P39061 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 AC107453.4-201ENSMUST00000227068 1817 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm25414-201ENSMUST00000101814 107 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm13806-201ENSMUST00000117822 325 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm12697-201ENSMUST00000118008 667 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm11825-201ENSMUST00000120710 736 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm7350-201ENSMUST00000120964 636 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC8.12□□□□□ -1.11
Col18a1P39061 Gm44316-201ENSMUST00000199274 97 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC8.12□□□□□ -1.11
Col18a1P39061 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC8.12□□□□□ -1.11
Col18a1P39061 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm45379-201ENSMUST00000211772 549 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 AC126554.2-201ENSMUST00000223259 400 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Col18a1P39061 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Gm45548-201ENSMUST00000210076 3167 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Col18a1P39061 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Col18a1P39061 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Col18a1P39061 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col18a1P39061 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col18a1P39061 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col18a1P39061 AC138765.2-202ENSMUST00000228418 3435 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC8.12□□□□□ -1.11
Col18a1P39061 Gm15428-201ENSMUST00000121352 333 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm12998-201ENSMUST00000122445 789 ntBASIC8.12□□□□□ -1.11
Col18a1P39061 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col18a1P39061 Gm24767-201ENSMUST00000158509 95 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms