Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col2a1P28481 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Col2a1P28481 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.77□□□□□ -1.32
Col2a1P28481 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.77□□□□□ -1.33
Col2a1P28481 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Col2a1P28481 Gm11774-201ENSMUST00000118601 293 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm11737-201ENSMUST00000118713 468 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm15044-201ENSMUST00000120703 598 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Gm25906-201ENSMUST00000158489 126 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.77□□□□□ -1.33
Col2a1P28481 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col2a1P28481 Gm27039-201ENSMUST00000182438 962 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm28943-201ENSMUST00000186187 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm28736-201ENSMUST00000186257 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm29401-201ENSMUST00000186690 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm29178-204ENSMUST00000186784 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm28589-201ENSMUST00000186991 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm28936-201ENSMUST00000187153 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm29121-201ENSMUST00000187611 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm28243-201ENSMUST00000187801 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm28844-202ENSMUST00000187977 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.77□□□□□ -1.33
Col2a1P28481 Gm29058-201ENSMUST00000189510 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm29624-201ENSMUST00000190018 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm28780-201ENSMUST00000190223 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm28969-211ENSMUST00000190992 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm28990-207ENSMUST00000191219 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm36468-201ENSMUST00000192119 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm31572-201ENSMUST00000193341 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm37716-201ENSMUST00000193553 947 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm30175-201ENSMUST00000194173 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm30858-201ENSMUST00000195516 615 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm29813-201ENSMUST00000195856 447 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm43467-201ENSMUST00000197441 437 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.77□□□□□ -1.33
Col2a1P28481 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.77□□□□□ -1.33
Col2a1P28481 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col2a1P28481 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Col2a1P28481 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Col2a1P28481 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col2a1P28481 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC6.77□□□□□ -1.33
Col2a1P28481 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col2a1P28481 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col2a1P28481 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
Col2a1P28481 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col2a1P28481 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.77□□□□□ -1.33
Col2a1P28481 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col2a1P28481 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Col2a1P28481 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col2a1P28481 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col2a1P28481 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col2a1P28481 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col2a1P28481 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Col2a1P28481 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col2a1P28481 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col2a1P28481 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col2a1P28481 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Col2a1P28481 Gm23224-201ENSMUST00000158122 271 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Gm24735-201ENSMUST00000158859 118 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col2a1P28481 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Gm42437-201ENSMUST00000197263 923 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Gm42652-201ENSMUST00000199073 614 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Gm6520-201ENSMUST00000200636 410 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Gm7832-201ENSMUST00000202613 880 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col2a1P28481 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.76□□□□□ -1.33
Col2a1P28481 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col2a1P28481 Gm23330-201ENSMUST00000082660 164 ntBASIC6.76□□□□□ -1.33
Col2a1P28481 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Col2a1P28481 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col2a1P28481 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms