Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdx1P18111 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.02□□□□□ -1.61
Cdx1P18111 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdx1P18111 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.02□□□□□ -1.61
Cdx1P18111 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cdx1P18111 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Cdx1P18111 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm26340-201ENSMUST00000102365 99 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdx1P18111 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdx1P18111 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm24989-201ENSMUST00000104461 88 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Snord88a-201ENSMUST00000116723 90 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm12874-201ENSMUST00000117190 913 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm7700-201ENSMUST00000120273 970 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm12307-201ENSMUST00000120581 590 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm14957-201ENSMUST00000121069 817 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm7494-201ENSMUST00000121248 441 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm26023-201ENSMUST00000122722 313 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.01□□□□□ -1.61
Cdx1P18111 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.01□□□□□ -1.61
Cdx1P18111 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm4373-201ENSMUST00000178571 556 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm27186-201ENSMUST00000184223 307 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm37770-201ENSMUST00000192855 772 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm37637-201ENSMUST00000195540 1256 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm19185-201ENSMUST00000196365 643 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Cdx1P18111 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.01□□□□□ -1.61
Cdx1P18111 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 CT009754.4-201ENSMUST00000221430 565 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 CT009495.1-201ENSMUST00000224221 862 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 AC154640.1-202ENSMUST00000227828 496 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdx1P18111 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdx1P18111 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Cdx1P18111 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Cdx1P18111 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.01□□□□□ -1.61
Cdx1P18111 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.01□□□□□ -1.61
Cdx1P18111 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5□□□□□ -1.61
Cdx1P18111 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
Cdx1P18111 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5□□□□□ -1.61
Cdx1P18111 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Gm42841-201ENSMUST00000199806 1932 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm24473-201ENSMUST00000104483 131 ntBASIC5□□□□□ -1.61
Cdx1P18111 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cdx1P18111 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Cdx1P18111 Gm11445-201ENSMUST00000119101 532 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm9435-201ENSMUST00000120379 877 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm13740-201ENSMUST00000120590 310 ntBASIC5□□□□□ -1.61
Cdx1P18111 Gm11472-201ENSMUST00000121305 556 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms