Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col1a1P11087 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC7.02□□□□□ -1.29
Col1a1P11087 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC7.02□□□□□ -1.29
Col1a1P11087 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC7.02□□□□□ -1.29
Col1a1P11087 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col1a1P11087 Gm42892-201ENSMUST00000196227 3973 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Gm22273-201ENSMUST00000104040 132 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC7.02□□□□□ -1.29
Col1a1P11087 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC7.02□□□□□ -1.29
Col1a1P11087 Gm23233-201ENSMUST00000157301 137 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 Gm24295-201ENSMUST00000158298 131 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 Mir1963-201ENSMUST00000158594 59 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 Gm15838-201ENSMUST00000161575 180 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 Gm17511-201ENSMUST00000172206 342 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 Gm29650-201ENSMUST00000188485 742 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 Gm28066-201ENSMUST00000188657 472 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC7.02□□□□□ -1.29
Col1a1P11087 Gm37838-201ENSMUST00000194464 312 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 Gm37341-201ENSMUST00000194680 371 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 Gm8523-201ENSMUST00000211386 552 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 AC153961.2-201ENSMUST00000218877 164 ntBASIC7.02□□□□□ -1.29
Col1a1P11087 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.02□□□□□ -1.29
Col1a1P11087 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col1a1P11087 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC7.02□□□□□ -1.29
Col1a1P11087 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC7.02□□□□□ -1.29
Col1a1P11087 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 Gm26984-201ENSMUST00000182345 3510 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 AC110043.1-201ENSMUST00000220278 1627 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
Col1a1P11087 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 Gm23750-201ENSMUST00000104222 132 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Gm2199-201ENSMUST00000119065 874 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Gm13473-201ENSMUST00000119289 367 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Atf1-ps-201ENSMUST00000120608 810 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC7.01□□□□□ -1.29
Col1a1P11087 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7.01□□□□□ -1.29
Col1a1P11087 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC7.01□□□□□ -1.29
Col1a1P11087 Gm22312-201ENSMUST00000158005 130 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC7.01□□□□□ -1.29
Col1a1P11087 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Col1a1P11087 Gm22993-201ENSMUST00000175423 254 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Gm22355-201ENSMUST00000175531 96 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC7.01□□□□□ -1.29
Col1a1P11087 Gm18117-201ENSMUST00000187720 742 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Api5-ps-201ENSMUST00000206607 577 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC7.01□□□□□ -1.29
Col1a1P11087 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Col1a1P11087 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 Gm17165-201ENSMUST00000096155 493 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Col1a1P11087 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
Col1a1P11087 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.01□□□□□ -1.29
Col1a1P11087 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 Gm44209-201ENSMUST00000204556 4153 ntBASIC7.01□□□□□ -1.29
Col1a1P11087 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
Col1a1P11087 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col1a1P11087 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Col1a1P11087 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col1a1P11087 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col1a1P11087 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7□□□□□ -1.29
Col1a1P11087 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Col1a1P11087 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Col1a1P11087 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7□□□□□ -1.29
Col1a1P11087 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Col1a1P11087 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col1a1P11087 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC7□□□□□ -1.29
Col1a1P11087 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC7□□□□□ -1.29
Col1a1P11087 Gm12074-201ENSMUST00000120189 219 ntBASIC7□□□□□ -1.29
Col1a1P11087 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC7□□□□□ -1.29
Col1a1P11087 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col1a1P11087 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms