Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm44312-201ENSMUST00000203536 469 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm19033-201ENSMUST00000208516 964 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm24041-201ENSMUST00000083115 156 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Olfr519-201ENSMUST00000084752 960 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm22371-201ENSMUST00000104588 130 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm15696-201ENSMUST00000121730 445 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm12833-201ENSMUST00000136112 477 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm26167-201ENSMUST00000158423 253 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm37838-201ENSMUST00000194464 312 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm19116-201ENSMUST00000218592 642 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Gm18405-201ENSMUST00000220743 511 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Chmp6P0C0A3 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm13772-201ENSMUST00000118431 317 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm12308-201ENSMUST00000120440 389 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm13578-201ENSMUST00000120849 590 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm12890-201ENSMUST00000120885 373 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm23430-201ENSMUST00000122490 314 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm17366-201ENSMUST00000167629 187 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm28996-201ENSMUST00000190316 721 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Gm6074-201ENSMUST00000193340 451 ntBASIC6.5□□□□□ -1.37
Chmp6P0C0A3 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms