Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm28443-201ENSMUST00000189081 698 ntBASIC7.74□□□□□ -1.17
Hoxc9P09633 Gm37341-201ENSMUST00000194680 371 ntBASIC7.74□□□□□ -1.17
Hoxc9P09633 Gm7733-201ENSMUST00000199038 919 ntBASIC7.74□□□□□ -1.17
Hoxc9P09633 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Hoxc9P09633 Gm31166-201ENSMUST00000209326 288 ntBASIC7.74□□□□□ -1.17
Hoxc9P09633 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.74□□□□□ -1.17
Hoxc9P09633 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Hoxc9P09633 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Hoxc9P09633 Gm24029-201ENSMUST00000083928 143 ntBASIC7.74□□□□□ -1.17
Hoxc9P09633 n-R5s46-201ENSMUST00000083960 116 ntBASIC7.74□□□□□ -1.17
Hoxc9P09633 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Hoxc9P09633 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Hoxc9P09633 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Hoxc9P09633 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Hoxc9P09633 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Hoxc9P09633 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.74□□□□□ -1.17
Hoxc9P09633 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Hoxc9P09633 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Hoxc9P09633 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Hoxc9P09633 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Hoxc9P09633 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Hoxc9P09633 Gm7337-202ENSMUST00000181439 2655 ntBASIC7.74□□□□□ -1.17
Hoxc9P09633 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Hoxc9P09633 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Hoxc9P09633 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hoxc9P09633 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hoxc9P09633 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Hoxc9P09633 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.73□□□□□ -1.17
Hoxc9P09633 AC112142.1-203ENSMUST00000228670 2472 ntBASIC7.73□□□□□ -1.17
Hoxc9P09633 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hoxc9P09633 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.73□□□□□ -1.17
Hoxc9P09633 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hoxc9P09633 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hoxc9P09633 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm12303-201ENSMUST00000119506 673 ntBASIC7.73□□□□□ -1.17
Hoxc9P09633 Mup-ps19-201ENSMUST00000120390 519 ntBASIC7.73□□□□□ -1.17
Hoxc9P09633 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC7.73□□□□□ -1.17
Hoxc9P09633 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm4617-201ENSMUST00000178993 331 ntBASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC7.73□□□□□ -1.17
Hoxc9P09633 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC7.73□□□□□ -1.17
Hoxc9P09633 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm7042-201ENSMUST00000223027 384 ntBASIC7.73□□□□□ -1.17
Hoxc9P09633 AC124408.2-201ENSMUST00000228168 645 ntBASIC7.73□□□□□ -1.17
Hoxc9P09633 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Hoxc9P09633 AC151984.1-201ENSMUST00000218261 2976 ntBASIC7.73□□□□□ -1.17
Hoxc9P09633 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC7.73□□□□□ -1.17
Hoxc9P09633 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm11804-201ENSMUST00000121663 468 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm26486-201ENSMUST00000158021 110 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm22993-201ENSMUST00000175423 254 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm29124-201ENSMUST00000186576 452 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm18969-201ENSMUST00000189423 730 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm43084-201ENSMUST00000200696 947 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm44053-201ENSMUST00000203364 929 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC7.72□□□□□ -1.17
Hoxc9P09633 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm43745-201ENSMUST00000198085 1883 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm37221-201ENSMUST00000194472 3007 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.72□□□□□ -1.17
Hoxc9P09633 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Hoxc9P09633 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms