Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm7091-201ENSMUST00000116438 586 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm15901-201ENSMUST00000117663 941 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm5601-201ENSMUST00000118909 972 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm14186-201ENSMUST00000120804 137 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm12870-201ENSMUST00000121383 1016 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm15141-201ENSMUST00000121860 729 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC6.12□□□□□ -1.43
Hoxd3P09027 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm22224-201ENSMUST00000157357 93 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm26086-201ENSMUST00000157902 263 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm25335-201ENSMUST00000158043 103 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm25363-201ENSMUST00000158850 245 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm17076-201ENSMUST00000165185 1401 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm25690-201ENSMUST00000175439 77 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm20794-201ENSMUST00000177626 628 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm15251-201ENSMUST00000177947 883 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm8296-201ENSMUST00000185597 524 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm2987-201ENSMUST00000187673 1693 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm7560-201ENSMUST00000187748 873 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm29362-201ENSMUST00000187898 133 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm9496-201ENSMUST00000191295 1601 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm36962-201ENSMUST00000192114 1761 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm37243-201ENSMUST00000193407 595 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm22149-202ENSMUST00000196259 137 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm43471-201ENSMUST00000197550 467 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm42965-201ENSMUST00000201254 250 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm43026-201ENSMUST00000202972 325 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm43990-201ENSMUST00000203790 1691 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm18423-201ENSMUST00000205144 1074 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm45198-201ENSMUST00000206796 591 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm45232-201ENSMUST00000207811 162 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm45375-201ENSMUST00000210338 280 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 AC165349.2-201ENSMUST00000219097 426 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm9289-201ENSMUST00000221269 606 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC6.12□□□□□ -1.43
Hoxd3P09027 AC146596.1-201ENSMUST00000223507 223 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 AC154806.1-202ENSMUST00000227949 885 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm9801-201ENSMUST00000054860 408 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm6054-201ENSMUST00000078052 378 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm23093-201ENSMUST00000083450 102 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm24763-201ENSMUST00000083688 190 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hoxd3P09027 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxd3P09027 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Hoxd3P09027 Gm37903-201ENSMUST00000192122 2381 ntBASIC6.11□□□□□ -1.43
Hoxd3P09027 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms