Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm18705-201ENSMUST00000215985 913 ntBASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccdc180J3QNE4 Gm37132-201ENSMUST00000195553 2238 ntBASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gm24230-201ENSMUST00000104313 129 ntBASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gm20480-201ENSMUST00000173953 250 ntBASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Igkv15-101-201ENSMUST00000195917 299 ntBASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gm43973-201ENSMUST00000203562 210 ntBASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gm44225-201ENSMUST00000203582 186 ntBASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gm3785-201ENSMUST00000221000 202 ntBASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gm18853-201ENSMUST00000183629 3596 ntBASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 AC120347.2-201ENSMUST00000222224 2015 ntBASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccdc180J3QNE4 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 AC158595.1-201ENSMUST00000217989 1435 ntBASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Gm24886-201ENSMUST00000104384 123 ntBASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Gm14606-201ENSMUST00000117078 1155 ntBASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Gm25962-201ENSMUST00000157173 168 ntBASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Igkv4-56-201ENSMUST00000198436 349 ntBASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 AC154417.1-201ENSMUST00000223876 476 ntBASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccdc180J3QNE4 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm4617-201ENSMUST00000178993 331 ntBASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm6070-201ENSMUST00000207275 419 ntBASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 AC103672.2-201ENSMUST00000228146 1687 ntBASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm37151-201ENSMUST00000194631 5007 ntBASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm11908-201ENSMUST00000117755 347 ntBASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm11825-201ENSMUST00000120710 736 ntBASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm24216-201ENSMUST00000158259 117 ntBASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ccdc180J3QNE4 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Gm37304-201ENSMUST00000193833 2886 ntBASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Gm43745-201ENSMUST00000198085 1883 ntBASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Gm14679-201ENSMUST00000121536 722 ntBASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Gm26106-201ENSMUST00000157254 228 ntBASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Gm18407-201ENSMUST00000192126 790 ntBASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Gm38015-201ENSMUST00000193048 188 ntBASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 AC164295.2-201ENSMUST00000228539 757 ntBASIC10.91□□□□□ -0.66
Ccdc180J3QNE4 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms