Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.08□□□□□ -1.12
NpcdF8VQB8 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
NpcdF8VQB8 Gm16123-201ENSMUST00000118647 1517 ntBASIC8.08□□□□□ -1.12
NpcdF8VQB8 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
NpcdF8VQB8 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
NpcdF8VQB8 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
NpcdF8VQB8 Gm9226-201ENSMUST00000188352 3489 ntBASIC8.08□□□□□ -1.12
NpcdF8VQB8 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
NpcdF8VQB8 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm42676-201ENSMUST00000197609 2686 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm18796-201ENSMUST00000190440 1767 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm7680-201ENSMUST00000216198 1348 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm2003-201ENSMUST00000118537 636 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm11624-201ENSMUST00000118579 1041 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm11504-201ENSMUST00000120211 173 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm12444-201ENSMUST00000121512 877 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm14122-201ENSMUST00000122076 973 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm3810-201ENSMUST00000122413 476 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm1989-201ENSMUST00000126244 636 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm23164-201ENSMUST00000175084 111 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm27155-201ENSMUST00000183716 898 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm43383-201ENSMUST00000195981 469 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm10416-201ENSMUST00000197379 645 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm44361-201ENSMUST00000197960 94 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm18215-201ENSMUST00000204429 798 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 CT485607.3-201ENSMUST00000213361 672 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 CT573422.1-201ENSMUST00000216655 405 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm32300-201ENSMUST00000221735 515 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Mir298-201ENSMUST00000083476 82 ntBASIC8.07□□□□□ -1.12
NpcdF8VQB8 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
NpcdF8VQB8 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NpcdF8VQB8 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Gm25917-201ENSMUST00000104267 130 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 Gm25795-201ENSMUST00000104421 132 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Gm12189-201ENSMUST00000119779 912 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 Gm22143-201ENSMUST00000157401 203 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Gm21909-201ENSMUST00000178260 439 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Gm37203-201ENSMUST00000191618 385 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 Gm43476-201ENSMUST00000197873 405 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.06□□□□□ -1.12
NpcdF8VQB8 AC109214.2-201ENSMUST00000220089 358 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 AC166358.9-201ENSMUST00000220653 375 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 AC133654.1-201ENSMUST00000228411 672 ntBASIC8.06□□□□□ -1.12
NpcdF8VQB8 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
NpcdF8VQB8 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms