Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm18775-201ENSMUST00000190763 586 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm3103-201ENSMUST00000198073 752 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm44565-201ENSMUST00000208194 269 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm45658-201ENSMUST00000209197 580 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm45514-201ENSMUST00000211531 689 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdh1F7BJK1 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm22470-201ENSMUST00000104117 130 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm15778-201ENSMUST00000118469 608 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm8916-201ENSMUST00000119732 949 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm12307-201ENSMUST00000120581 590 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm14589-201ENSMUST00000121640 727 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm15038-201ENSMUST00000122144 296 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm29299-201ENSMUST00000185609 923 ntBASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Pcdh1F7BJK1 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms