Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm6427-201ENSMUST00000118721 979 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm43078-201ENSMUST00000197222 168 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm7670-201ENSMUST00000121272 641 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm14679-201ENSMUST00000121536 722 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm3216-201ENSMUST00000166927 486 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm3141-201ENSMUST00000168726 499 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm44984-201ENSMUST00000207802 394 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.17□□□□□ -1.42
Col4a6B1AVK5 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm22273-201ENSMUST00000104040 132 ntBASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm13473-201ENSMUST00000119289 367 ntBASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm15877-201ENSMUST00000121897 964 ntBASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm22993-201ENSMUST00000175423 254 ntBASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Mir6943-201ENSMUST00000185186 66 ntBASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm28385-201ENSMUST00000185671 292 ntBASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.16□□□□□ -1.42
Col4a6B1AVK5 Gm43779-201ENSMUST00000196691 829 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms