Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scn1aA2APX8 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Scn1aA2APX8 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.21□□□□□ -1.42
Scn1aA2APX8 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm6382-201ENSMUST00000118873 942 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm12488-201ENSMUST00000122449 499 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm17121-201ENSMUST00000170414 847 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm17222-201ENSMUST00000180135 847 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm43467-201ENSMUST00000197441 437 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 AC154257.1-201ENSMUST00000224811 1525 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm25962-201ENSMUST00000157173 168 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm24731-201ENSMUST00000158227 131 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm6472-201ENSMUST00000178147 651 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm27193-201ENSMUST00000184217 586 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm28883-201ENSMUST00000189256 369 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm45026-201ENSMUST00000205292 833 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm23624-201ENSMUST00000082463 321 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm17165-201ENSMUST00000096155 493 ntBASIC6.2□□□□□ -1.42
Scn1aA2APX8 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Scn1aA2APX8 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Gm7700-201ENSMUST00000120273 970 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 Gm15877-201ENSMUST00000121897 964 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Mir7653-201ENSMUST00000184358 61 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Gm6520-201ENSMUST00000200636 410 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 Gm5027-201ENSMUST00000206700 375 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 Gm45874-201ENSMUST00000212423 346 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Gm18591-201ENSMUST00000220568 763 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Tcf24-201ENSMUST00000097824 2639 ntBASIC6.19□□□□□ -1.42
Scn1aA2APX8 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Scn1aA2APX8 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm20401-201ENSMUST00000173717 212 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Gm43116-201ENSMUST00000199789 195 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.18□□□□□ -1.42
Scn1aA2APX8 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Scn1aA2APX8 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms