Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm13114-201ENSMUST00000117605 106 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm6446-201ENSMUST00000120604 818 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm15618-201ENSMUST00000121610 452 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm15237-201ENSMUST00000122104 469 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm25387-201ENSMUST00000157813 132 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm24300-201ENSMUST00000177809 109 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm24017-201ENSMUST00000178726 109 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm17048-201ENSMUST00000179266 847 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm23952-201ENSMUST00000179380 109 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm5430-201ENSMUST00000182525 915 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm37463-201ENSMUST00000193819 796 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm44316-201ENSMUST00000199274 97 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm9088-201ENSMUST00000220237 508 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm8256-203ENSMUST00000228692 591 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.08□□□□□ -1.44
Cldn3Q9Z0G9 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm15300-201ENSMUST00000122324 279 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Snora47-201ENSMUST00000157483 138 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm23903-201ENSMUST00000157566 131 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm20620-201ENSMUST00000177528 168 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm6631-201ENSMUST00000193699 559 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm44809-201ENSMUST00000208305 993 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm45733-201ENSMUST00000212988 437 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm18405-201ENSMUST00000220743 511 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cldn3Q9Z0G9 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms