Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm22774-201ENSMUST00000102084 109 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 n-R5s207-201ENSMUST00000122497 118 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm23591-201ENSMUST00000157663 286 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm8358-201ENSMUST00000167222 555 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm29383-201ENSMUST00000188284 480 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm38050-201ENSMUST00000191904 238 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm43212-201ENSMUST00000198208 394 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Igkv13-82-201ENSMUST00000200308 346 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm17906-201ENSMUST00000202480 901 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm34149-201ENSMUST00000203547 304 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 AC110381.1-201ENSMUST00000218987 586 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 AV026068-218ENSMUST00000223980 575 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 AC132112.1-201ENSMUST00000226354 505 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Gm37936-201ENSMUST00000194647 1322 ntBASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ube3bQ9ES34 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 AC154841.1-201ENSMUST00000227263 1479 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm25311-201ENSMUST00000104136 132 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Snord65-201ENSMUST00000104269 72 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm13672-201ENSMUST00000117554 459 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm15126-201ENSMUST00000118631 833 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm14919-201ENSMUST00000120839 390 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm12881-201ENSMUST00000121191 203 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm25281-201ENSMUST00000157270 104 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm21737-201ENSMUST00000178112 664 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm20874-201ENSMUST00000178356 663 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm21744-201ENSMUST00000178403 662 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm4373-201ENSMUST00000178571 556 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm23003-201ENSMUST00000179948 107 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm20901-201ENSMUST00000180177 664 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm8245-201ENSMUST00000182434 987 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm27796-201ENSMUST00000183863 261 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm6717-201ENSMUST00000185549 838 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm28090-201ENSMUST00000189458 664 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm21647-201ENSMUST00000189755 664 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm37098-201ENSMUST00000192290 244 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm2860-201ENSMUST00000199226 707 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 AC073947.3-201ENSMUST00000215576 766 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm46192-201ENSMUST00000217894 326 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 AC127242.3-201ENSMUST00000222009 580 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.53□□□□□ -1.04
Ube3bQ9ES34 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Ube3bQ9ES34 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms