Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AC131667.1-201ENSMUST00000214665 2175 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm24284-201ENSMUST00000104240 142 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm11410-201ENSMUST00000120053 1143 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm5809-201ENSMUST00000121854 529 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm6568-201ENSMUST00000122274 697 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm23145-201ENSMUST00000178912 79 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm4308-201ENSMUST00000179735 914 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm29064-201ENSMUST00000187014 813 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm2860-201ENSMUST00000199226 707 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm5314-201ENSMUST00000204852 466 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm6230-201ENSMUST00000208077 780 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm2225-201ENSMUST00000209570 377 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 AC079644.3-201ENSMUST00000222452 357 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 CT030166.1-201ENSMUST00000222654 357 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 AC119573.1-201ENSMUST00000227960 757 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm23378-201ENSMUST00000082942 107 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.77□□□□□ -1.17
Trim11Q99PQ2 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Mir708-201ENSMUST00000102189 109 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm14729-201ENSMUST00000118373 689 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm14360-201ENSMUST00000120670 393 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Defa-ps10-201ENSMUST00000121649 171 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm22836-201ENSMUST00000158441 61 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm25717-201ENSMUST00000158631 353 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm18848-201ENSMUST00000182069 792 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm18426-201ENSMUST00000191874 973 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm36448-201ENSMUST00000199916 438 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm43108-201ENSMUST00000200525 293 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm43227-201ENSMUST00000202239 677 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm44380-201ENSMUST00000203125 293 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm7943-201ENSMUST00000212078 1034 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim11Q99PQ2 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.76□□□□□ -1.17
Trim11Q99PQ2 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms