Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm15203-201ENSMUST00000117668 455 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm11443-201ENSMUST00000118790 479 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm15659-201ENSMUST00000118881 341 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm13207-201ENSMUST00000119862 773 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm18727-201ENSMUST00000185981 553 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm19280-201ENSMUST00000190191 205 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm37288-201ENSMUST00000193963 334 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm43141-201ENSMUST00000199695 274 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm20223-201ENSMUST00000199932 805 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm9118-201ENSMUST00000219246 754 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 CT025603.4-201ENSMUST00000225777 413 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm8107-201ENSMUST00000117477 2009 ntBASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Nkx6-1Q99MA9 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm44117-201ENSMUST00000204442 1758 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm21152-201ENSMUST00000190271 3483 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm38315-201ENSMUST00000194286 2437 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm45182-201ENSMUST00000207579 2404 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Grik1-210ENSMUST00000228034 2708 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm8844-201ENSMUST00000119460 2614 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm24272-201ENSMUST00000102329 98 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm13772-201ENSMUST00000118431 317 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm12710-201ENSMUST00000119011 216 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm14939-201ENSMUST00000120347 680 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm13462-201ENSMUST00000121472 961 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm11990-201ENSMUST00000121505 897 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm12101-201ENSMUST00000121590 390 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm23205-201ENSMUST00000158671 103 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm22262-201ENSMUST00000158713 86 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm24228-201ENSMUST00000158829 129 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm17085-201ENSMUST00000165425 502 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm27653-201ENSMUST00000185037 136 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm43383-201ENSMUST00000195981 469 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm5711-201ENSMUST00000197896 421 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm43089-201ENSMUST00000199162 275 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm3511-201ENSMUST00000199823 204 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm2602-201ENSMUST00000202112 571 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm4083-201ENSMUST00000207158 451 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm18410-201ENSMUST00000207199 577 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm8748-201ENSMUST00000211125 587 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 AC153541.1-201ENSMUST00000213786 294 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nkx6-1Q99MA9 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms