Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm18469-201ENSMUST00000208850 439 ntBASIC7.49□□□□□ -1.21
Clp1Q99LI9 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Gm18729-201ENSMUST00000217230 621 ntBASIC7.49□□□□□ -1.21
Clp1Q99LI9 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Gm5374-201ENSMUST00000222868 657 ntBASIC7.49□□□□□ -1.21
Clp1Q99LI9 Zfp429-203ENSMUST00000224684 524 ntBASIC7.49□□□□□ -1.21
Clp1Q99LI9 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Gm2840-201ENSMUST00000048361 411 ntBASIC7.49□□□□□ -1.21
Clp1Q99LI9 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC7.49□□□□□ -1.21
Clp1Q99LI9 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.49□□□□□ -1.21
Clp1Q99LI9 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Gm7205-201ENSMUST00000196032 1323 ntBASIC7.49□□□□□ -1.21
Clp1Q99LI9 Gm10744-201ENSMUST00000220184 2706 ntBASIC7.49□□□□□ -1.21
Clp1Q99LI9 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.49□□□□□ -1.21
Clp1Q99LI9 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clp1Q99LI9 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm24709-201ENSMUST00000104123 132 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm22374-201ENSMUST00000104583 132 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm14413-201ENSMUST00000122158 408 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm25435-201ENSMUST00000158277 267 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm24176-201ENSMUST00000158928 121 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm25525-201ENSMUST00000177701 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm26178-201ENSMUST00000177706 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm26465-201ENSMUST00000178517 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm24317-201ENSMUST00000178536 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm25021-201ENSMUST00000179184 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm22995-201ENSMUST00000179670 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm24424-201ENSMUST00000179714 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm24389-201ENSMUST00000179962 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm23186-201ENSMUST00000180078 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm25672-201ENSMUST00000180111 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm29163-201ENSMUST00000188029 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm28846-201ENSMUST00000189161 368 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm43089-201ENSMUST00000199162 275 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 AC140930.4-201ENSMUST00000220750 150 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 AC156559.2-201ENSMUST00000224403 384 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm25586-201ENSMUST00000082499 112 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm24207-201ENSMUST00000082781 108 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm23815-201ENSMUST00000083231 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm22865-201ENSMUST00000083949 214 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm23520-201ENSMUST00000093736 107 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.48□□□□□ -1.21
Clp1Q99LI9 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clp1Q99LI9 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clp1Q99LI9 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Clp1Q99LI9 Gm38374-201ENSMUST00000194417 2033 ntBASIC7.47□□□□□ -1.21
Clp1Q99LI9 AC153912.2-201ENSMUST00000215840 2015 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms