Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm33178-201ENSMUST00000212090 257 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 AC133598.2-201ENSMUST00000224302 624 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 AC154757.2-201ENSMUST00000228885 743 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm37311-201ENSMUST00000195541 2024 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Ccdc9Q8VC31 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Ccdc9Q8VC31 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
Ccdc9Q8VC31 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm25379-201ENSMUST00000104338 114 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm25724-201ENSMUST00000104531 117 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm13333-201ENSMUST00000119424 781 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm15801-201ENSMUST00000120920 522 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm14038-201ENSMUST00000121500 807 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm22025-201ENSMUST00000122734 302 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm8783-201ENSMUST00000159764 522 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm17022-201ENSMUST00000166415 922 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Mir6241-201ENSMUST00000184225 103 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm21147-201ENSMUST00000186046 913 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm38170-201ENSMUST00000195404 816 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm43467-201ENSMUST00000197441 437 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm44892-201ENSMUST00000208595 488 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 AC164550.1-201ENSMUST00000217821 1066 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm2398-201ENSMUST00000218347 883 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 AC125539.1-202ENSMUST00000226449 670 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm5582-201ENSMUST00000075251 522 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm26226-201ENSMUST00000082509 116 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm19093-201ENSMUST00000210671 1454 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Ccdc9Q8VC31 Gm37897-201ENSMUST00000192613 3561 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm25415-201ENSMUST00000104220 132 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm26419-201ENSMUST00000104272 133 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm11447-201ENSMUST00000118983 858 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm3760-201ENSMUST00000167475 804 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm20545-201ENSMUST00000174739 210 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm27596-201ENSMUST00000185061 83 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm43689-201ENSMUST00000195951 427 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm42919-201ENSMUST00000197753 1284 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm9604-201ENSMUST00000211175 433 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.26□□□□□ -1.25
Ccdc9Q8VC31 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms