Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 AC110043.1-201ENSMUST00000220278 1627 ntBASIC4.78□□□□□ -1.64
Nup35Q8R4R6 Gm26984-201ENSMUST00000182345 3510 ntBASIC4.78□□□□□ -1.64
Nup35Q8R4R6 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Nup35Q8R4R6 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Nup35Q8R4R6 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Nup35Q8R4R6 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC4.78□□□□□ -1.64
Nup35Q8R4R6 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC4.78□□□□□ -1.64
Nup35Q8R4R6 AC144733.2-201ENSMUST00000222552 2292 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm45562-201ENSMUST00000210015 1537 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 AC158981.2-201ENSMUST00000227565 1537 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 AC125095.1-201ENSMUST00000228387 2020 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm25093-201ENSMUST00000103993 132 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm22499-201ENSMUST00000104501 135 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm16073-201ENSMUST00000116032 517 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm11447-201ENSMUST00000118983 858 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm12101-201ENSMUST00000121590 390 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm14847-201ENSMUST00000121978 519 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm12175-201ENSMUST00000122081 345 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm5871-201ENSMUST00000176461 718 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm6223-201ENSMUST00000178436 871 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm17048-201ENSMUST00000179266 847 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm7713-201ENSMUST00000181201 1007 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm10136-201ENSMUST00000183196 435 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Mir6769b-201ENSMUST00000184793 60 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm37341-201ENSMUST00000194680 371 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm7181-201ENSMUST00000202197 434 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 AC129597.1-201ENSMUST00000223046 1234 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 AL591843.1-201ENSMUST00000223686 3082 ntBASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Nup35Q8R4R6 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.76□□□□□ -1.65
Nup35Q8R4R6 AC121942.1-201ENSMUST00000224459 2891 ntBASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Slco6b1-202ENSMUST00000178359 1778 ntBASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Gm8250-201ENSMUST00000117398 774 ntBASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Mirt2-201ENSMUST00000175179 285 ntBASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Mir6908-201ENSMUST00000184056 63 ntBASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Gm37784-201ENSMUST00000193233 189 ntBASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nup35Q8R4R6 Gm44463-201ENSMUST00000198895 137 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms