Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Mir1960-201ENSMUST00000157488 78 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm27004-201ENSMUST00000183300 727 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Mir8114-201ENSMUST00000183582 111 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm28080-201ENSMUST00000188552 722 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm21524-201ENSMUST00000190499 696 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm21715-201ENSMUST00000191056 694 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm46311-201ENSMUST00000217971 203 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm18405-201ENSMUST00000220743 511 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.18□□□□□ -1.42
Ccdc28aQ8CEI3 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Gm22499-201ENSMUST00000104501 135 ntBASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Gm28066-201ENSMUST00000188657 472 ntBASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Gm24200-201ENSMUST00000082955 157 ntBASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc28aQ8CEI3 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm14842-201ENSMUST00000119577 269 ntBASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm13998-201ENSMUST00000120952 335 ntBASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm23757-201ENSMUST00000158353 100 ntBASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm4202-201ENSMUST00000169025 733 ntBASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm20690-201ENSMUST00000177341 315 ntBASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28aQ8CEI3 Gm37581-201ENSMUST00000192371 988 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms