Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm22569-201ENSMUST00000175545 124 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm28926-201ENSMUST00000191063 680 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm5694-201ENSMUST00000195648 641 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm43946-201ENSMUST00000204058 886 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 AC131117.1-201ENSMUST00000225154 1171 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm5229-201ENSMUST00000039375 354 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm24041-201ENSMUST00000083115 156 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Snora35-201ENSMUST00000104579 128 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm22952-201ENSMUST00000116720 120 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm12451-201ENSMUST00000121636 633 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm27348-201ENSMUST00000184511 170 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm28973-201ENSMUST00000189310 613 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm37614-201ENSMUST00000195645 210 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm18839-201ENSMUST00000204292 670 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm33312-201ENSMUST00000222443 332 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm8412-201ENSMUST00000077493 440 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm10145-201ENSMUST00000077776 462 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Gm10705-201ENSMUST00000098980 461 ntBASIC6.72□□□□□ -1.33
Trim9Q8C7M3 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Trim9Q8C7M3 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Trim9Q8C7M3 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Trim9Q8C7M3 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Trim9Q8C7M3 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Trim9Q8C7M3 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.71□□□□□ -1.33
Trim9Q8C7M3 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Trim9Q8C7M3 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.71□□□□□ -1.33
Trim9Q8C7M3 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Trim9Q8C7M3 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Trim9Q8C7M3 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm15332-201ENSMUST00000118386 357 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm12713-201ENSMUST00000118404 764 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm4234-201ENSMUST00000119747 714 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm12308-201ENSMUST00000120440 389 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm14840-201ENSMUST00000122135 594 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm24382-201ENSMUST00000122698 107 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm22428-201ENSMUST00000158554 132 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm17121-201ENSMUST00000170414 847 ntBASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim9Q8C7M3 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms