Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm22676-201ENSMUST00000116972 129 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm11909-201ENSMUST00000121424 759 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm12494-201ENSMUST00000121684 521 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm26106-201ENSMUST00000157254 228 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Mir1963-201ENSMUST00000158594 59 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm23806-201ENSMUST00000175157 109 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm42522-201ENSMUST00000196071 255 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm45082-201ENSMUST00000206082 601 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm6101-201ENSMUST00000195384 1867 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm18036-201ENSMUST00000195256 272 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.41□□□□□ -1.54
Col6a6Q8C6K9 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm37525-201ENSMUST00000193499 2871 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm13137-201ENSMUST00000118035 345 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm8595-201ENSMUST00000118250 630 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm23546-201ENSMUST00000158211 137 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm8367-201ENSMUST00000186145 887 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm44456-201ENSMUST00000196554 89 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm7181-201ENSMUST00000202197 434 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm22053-201ENSMUST00000083394 200 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col6a6Q8C6K9 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm43581-201ENSMUST00000196766 2864 ntBASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col6a6Q8C6K9 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms