Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm24628-201ENSMUST00000122761 289 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm29356-201ENSMUST00000186935 373 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm5692-201ENSMUST00000187254 1057 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm28066-201ENSMUST00000188657 472 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm28952-201ENSMUST00000189285 681 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm36638-201ENSMUST00000193295 400 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm19089-201ENSMUST00000197207 613 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm9419-201ENSMUST00000200672 567 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm17984-201ENSMUST00000205286 859 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm44971-201ENSMUST00000206192 337 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm6828-201ENSMUST00000207902 1186 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm44754-201ENSMUST00000208155 400 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm45782-201ENSMUST00000212670 366 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm45725-201ENSMUST00000212962 337 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 AC073947.3-201ENSMUST00000215576 766 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 AC124510.2-201ENSMUST00000221958 683 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm38090-201ENSMUST00000195733 1942 ntBASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Trim47Q8C0E3 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm37321-201ENSMUST00000195742 1872 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8□□□□□ -1.13
Trim47Q8C0E3 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm22231-201ENSMUST00000101027 73 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm22072-201ENSMUST00000116850 121 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm8757-201ENSMUST00000119660 372 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm13486-201ENSMUST00000119910 282 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm14991-201ENSMUST00000119913 598 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm15967-201ENSMUST00000120027 1116 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm12535-201ENSMUST00000121025 484 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm8722-201ENSMUST00000121466 769 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm22199-201ENSMUST00000122660 126 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm23435-201ENSMUST00000157183 156 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim47Q8C0E3 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim47Q8C0E3 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm5261-201ENSMUST00000185860 713 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm28580-201ENSMUST00000186767 88 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm29490-201ENSMUST00000190923 342 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm38373-201ENSMUST00000192042 288 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Ighv1-73-201ENSMUST00000197435 352 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm18593-201ENSMUST00000200754 1139 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm19457-201ENSMUST00000200995 448 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm44910-201ENSMUST00000208451 396 ntBASIC8□□□□□ -1.13
Trim47Q8C0E3 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC8□□□□□ -1.13
Trim47Q8C0E3 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC8□□□□□ -1.13
Trim47Q8C0E3 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 124.6 ms