Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Nup98Q6PFD9 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Gm24692-201ENSMUST00000157761 146 ntBASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Gm28467-201ENSMUST00000190981 318 ntBASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Gm9480-201ENSMUST00000198038 616 ntBASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Nup98Q6PFD9 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm14512-201ENSMUST00000117924 230 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm22596-201ENSMUST00000157601 316 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Mir1963-201ENSMUST00000158594 59 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm37716-201ENSMUST00000193553 947 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm43148-201ENSMUST00000198237 520 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm4548-201ENSMUST00000208487 509 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm11825-201ENSMUST00000120710 736 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm26738-201ENSMUST00000181312 601 ntBASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Nup98Q6PFD9 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
Nup98Q6PFD9 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Nup98Q6PFD9 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.96□□□□□ -1.29
Nup98Q6PFD9 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
Nup98Q6PFD9 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.96□□□□□ -1.29
Nup98Q6PFD9 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Nup98Q6PFD9 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Nup98Q6PFD9 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Nup98Q6PFD9 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Nup98Q6PFD9 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 119.6 ms