Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CiitaP79621 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CiitaP79621 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CiitaP79621 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CiitaP79621 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.64□□□□□ -1.35
CiitaP79621 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.64□□□□□ -1.35
CiitaP79621 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CiitaP79621 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CiitaP79621 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CiitaP79621 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
CiitaP79621 Gm12193-201ENSMUST00000117250 379 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm13679-201ENSMUST00000118678 484 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm13493-201ENSMUST00000120318 493 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm12308-201ENSMUST00000120440 389 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm14237-201ENSMUST00000122080 430 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.64□□□□□ -1.35
CiitaP79621 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.64□□□□□ -1.35
CiitaP79621 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CiitaP79621 Gm23995-201ENSMUST00000158060 129 ntBASIC6.64□□□□□ -1.35
CiitaP79621 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm17711-201ENSMUST00000172028 237 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm19560-201ENSMUST00000177510 514 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CiitaP79621 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
CiitaP79621 Gm27219-201ENSMUST00000184633 742 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.64□□□□□ -1.35
CiitaP79621 Gm37838-201ENSMUST00000194464 312 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC6.64□□□□□ -1.35
CiitaP79621 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm2040-201ENSMUST00000202979 289 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.64□□□□□ -1.35
CiitaP79621 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.64□□□□□ -1.35
CiitaP79621 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm7802-201ENSMUST00000216464 262 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm36262-201ENSMUST00000223274 499 ntBASIC6.64□□□□□ -1.35
CiitaP79621 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.64□□□□□ -1.35
CiitaP79621 CT025523.1-201ENSMUST00000228318 694 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CiitaP79621 Gm5612-201ENSMUST00000053326 375 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CiitaP79621 Gm8412-201ENSMUST00000077493 440 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Gm8526-201ENSMUST00000079153 475 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
CiitaP79621 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CiitaP79621 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CiitaP79621 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.64□□□□□ -1.35
CiitaP79621 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.64□□□□□ -1.35
CiitaP79621 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CiitaP79621 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
CiitaP79621 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CiitaP79621 Gm20486-201ENSMUST00000101544 128 ntBASIC6.63□□□□□ -1.35
CiitaP79621 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
CiitaP79621 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.63□□□□□ -1.35
CiitaP79621 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.63□□□□□ -1.35
CiitaP79621 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Gm22599-201ENSMUST00000157597 132 ntBASIC6.63□□□□□ -1.35
CiitaP79621 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.63□□□□□ -1.35
CiitaP79621 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Gm7952-201ENSMUST00000180540 984 ntBASIC6.63□□□□□ -1.35
CiitaP79621 Gm8241-201ENSMUST00000189286 816 ntBASIC6.63□□□□□ -1.35
CiitaP79621 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
CiitaP79621 Gm32158-201ENSMUST00000200135 404 ntBASIC6.63□□□□□ -1.35
CiitaP79621 Gm43105-201ENSMUST00000202987 459 ntBASIC6.63□□□□□ -1.35
CiitaP79621 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.63□□□□□ -1.35
CiitaP79621 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CiitaP79621 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.63□□□□□ -1.35
CiitaP79621 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.63□□□□□ -1.35
CiitaP79621 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.63□□□□□ -1.35
CiitaP79621 Gm5229-201ENSMUST00000039375 354 ntBASIC6.63□□□□□ -1.35
CiitaP79621 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CiitaP79621 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CiitaP79621 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.63□□□□□ -1.35
CiitaP79621 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.63□□□□□ -1.35
CiitaP79621 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CiitaP79621 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
CiitaP79621 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms