Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Hmgb1P63158 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.23□□□□□ -1.25
Hmgb1P63158 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.23□□□□□ -1.25
Hmgb1P63158 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Hmgb1P63158 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Snord88a-201ENSMUST00000116723 90 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm6067-201ENSMUST00000121648 491 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm14728-201ENSMUST00000122196 492 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm11545-201ENSMUST00000146507 375 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm22820-201ENSMUST00000157205 329 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Mir1981-201ENSMUST00000157934 82 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm26959-201ENSMUST00000182376 978 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm28586-201ENSMUST00000189857 456 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm28620-201ENSMUST00000190463 439 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm36965-201ENSMUST00000193797 394 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Ighv8-1-201ENSMUST00000194897 291 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm43664-201ENSMUST00000196038 734 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm8454-201ENSMUST00000196980 811 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm44281-201ENSMUST00000203090 166 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm45279-201ENSMUST00000210315 391 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm18996-201ENSMUST00000214851 755 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm21731-201ENSMUST00000079524 489 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Hmgb1P63158 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 AC132852.2-201ENSMUST00000216052 2794 ntBASIC7.22□□□□□ -1.25
Hmgb1P63158 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Hmgb1P63158 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
Hmgb1P63158 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Hmgb1P63158 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Hmgb1P63158 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Hmgb1P63158 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC7.21□□□□□ -1.25
Hmgb1P63158 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Hmgb1P63158 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
Hmgb1P63158 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Hmgb1P63158 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC7.21□□□□□ -1.25
Hmgb1P63158 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.21□□□□□ -1.25
Hmgb1P63158 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Hmgb1P63158 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Hmgb1P63158 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC7.21□□□□□ -1.25
Hmgb1P63158 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Hmgb1P63158 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm45644-201ENSMUST00000210255 2740 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Hmgb1P63158 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm7821-201ENSMUST00000117111 788 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm14755-201ENSMUST00000118037 384 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm5387-201ENSMUST00000119776 857 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm14900-201ENSMUST00000120304 733 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm14156-201ENSMUST00000121538 483 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm15141-201ENSMUST00000121860 729 ntBASIC7.21□□□□□ -1.26
Hmgb1P63158 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms