Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm15094-201ENSMUST00000118394 1131 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm11976-201ENSMUST00000119236 295 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm13808-201ENSMUST00000121353 184 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm12754-201ENSMUST00000121908 454 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Klra11-ps-201ENSMUST00000122033 810 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.17□□□□□ -1.26
Sox1P53783 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC7.17□□□□□ -1.26
Sox1P53783 Gm5611-201ENSMUST00000164523 852 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm17085-201ENSMUST00000165425 502 ntBASIC7.17□□□□□ -1.26
Sox1P53783 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Sox1P53783 Gm28023-201ENSMUST00000184556 60 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm27825-201ENSMUST00000184586 60 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm28661-201ENSMUST00000188231 681 ntBASIC7.17□□□□□ -1.26
Sox1P53783 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.17□□□□□ -1.26
Sox1P53783 Gm20832-201ENSMUST00000189076 665 ntBASIC7.17□□□□□ -1.26
Sox1P53783 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC7.17□□□□□ -1.26
Sox1P53783 Gm8419-201ENSMUST00000189886 412 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm30638-201ENSMUST00000195570 656 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm36728-201ENSMUST00000195782 665 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm32983-201ENSMUST00000208500 505 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Gm45750-201ENSMUST00000211966 354 ntBASIC7.17□□□□□ -1.26
Sox1P53783 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC7.17□□□□□ -1.26
Sox1P53783 Gm2099-201ENSMUST00000220979 412 ntBASIC7.17□□□□□ -1.26
Sox1P53783 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC7.17□□□□□ -1.26
Sox1P53783 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC7.17□□□□□ -1.26
Sox1P53783 AC154329.2-201ENSMUST00000225257 383 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
Sox1P53783 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Sox1P53783 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Gm24623-201ENSMUST00000082616 194 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
Sox1P53783 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 AC190403.1-201ENSMUST00000224515 1325 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.17□□□□□ -1.26
Sox1P53783 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Sox1P53783 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Sox1P53783 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Sox1P53783 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.16□□□□□ -1.26
Sox1P53783 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.16□□□□□ -1.26
Sox1P53783 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC7.16□□□□□ -1.26
Sox1P53783 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
Sox1P53783 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC7.16□□□□□ -1.26
Sox1P53783 Gm25346-201ENSMUST00000104509 128 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm22372-201ENSMUST00000104589 136 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm12643-201ENSMUST00000116078 374 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm15781-201ENSMUST00000120216 323 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm12630-201ENSMUST00000121575 784 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm14411-201ENSMUST00000121798 914 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm26162-201ENSMUST00000157793 132 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm25981-201ENSMUST00000157921 295 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm24050-201ENSMUST00000158623 290 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.16□□□□□ -1.26
Sox1P53783 Mir7006-201ENSMUST00000183624 69 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm27942-201ENSMUST00000184669 101 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC7.16□□□□□ -1.26
Sox1P53783 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC7.16□□□□□ -1.26
Sox1P53783 Gm18728-201ENSMUST00000186155 753 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm9236-201ENSMUST00000196892 587 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm18430-201ENSMUST00000197534 682 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.16□□□□□ -1.26
Sox1P53783 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Sox1P53783 Gm44003-201ENSMUST00000203024 490 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm43979-201ENSMUST00000203179 475 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm44312-201ENSMUST00000203536 469 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC7.16□□□□□ -1.26
Sox1P53783 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC7.16□□□□□ -1.26
Sox1P53783 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Gm45497-201ENSMUST00000211701 740 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.16□□□□□ -1.26
Sox1P53783 Gm46312-201ENSMUST00000220961 420 ntBASIC7.16□□□□□ -1.26
Sox1P53783 AC123920.1-201ENSMUST00000221449 384 ntBASIC7.16□□□□□ -1.26
Sox1P53783 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Sox1P53783 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Sox1P53783 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms