Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm3883-201ENSMUST00000098119 3229 ntBASIC9.19□□□□□ -0.94
Cux1P53564 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Cux1P53564 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Cux1P53564 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Cux1P53564 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Cux1P53564 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Cux1P53564 Gm13473-201ENSMUST00000119289 367 ntBASIC9.18□□□□□ -0.94
Cux1P53564 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC9.18□□□□□ -0.94
Cux1P53564 Gm3216-201ENSMUST00000166927 486 ntBASIC9.18□□□□□ -0.94
Cux1P53564 Gm3141-201ENSMUST00000168726 499 ntBASIC9.18□□□□□ -0.94
Cux1P53564 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC9.18□□□□□ -0.94
Cux1P53564 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC9.18□□□□□ -0.94
Cux1P53564 Gm6049-201ENSMUST00000222369 458 ntBASIC9.18□□□□□ -0.94
Cux1P53564 AC126554.2-201ENSMUST00000223259 400 ntBASIC9.18□□□□□ -0.94
Cux1P53564 AC164295.2-201ENSMUST00000228539 757 ntBASIC9.18□□□□□ -0.94
Cux1P53564 Gm5436-201ENSMUST00000058103 643 ntBASIC9.18□□□□□ -0.94
Cux1P53564 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC9.18□□□□□ -0.94
Cux1P53564 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Mir188-201ENSMUST00000083464 68 ntBASIC9.18□□□□□ -0.94
Cux1P53564 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Cux1P53564 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Gm14895-201ENSMUST00000121858 1361 ntBASIC9.18□□□□□ -0.94
Cux1P53564 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC9.18□□□□□ -0.94
Cux1P53564 Gm8141-201ENSMUST00000190856 1723 ntBASIC9.18□□□□□ -0.94
Cux1P53564 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Gm43503-201ENSMUST00000200033 3408 ntBASIC9.18□□□□□ -0.94
Cux1P53564 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cux1P53564 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Cux1P53564 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cux1P53564 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cux1P53564 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC9.17□□□□□ -0.94
Cux1P53564 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cux1P53564 Gm37142-201ENSMUST00000193718 3110 ntBASIC9.17□□□□□ -0.94
Cux1P53564 Mir3090-201ENSMUST00000175597 87 ntBASIC9.17□□□□□ -0.94
Cux1P53564 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Cux1P53564 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cux1P53564 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC9.17□□□□□ -0.94
Cux1P53564 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC9.17□□□□□ -0.94
Cux1P53564 Gm44053-201ENSMUST00000203364 929 ntBASIC9.17□□□□□ -0.94
Cux1P53564 Gm18422-201ENSMUST00000203663 1032 ntBASIC9.17□□□□□ -0.94
Cux1P53564 Gm44683-201ENSMUST00000209088 484 ntBASIC9.17□□□□□ -0.94
Cux1P53564 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC9.17□□□□□ -0.94
Cux1P53564 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC9.17□□□□□ -0.94
Cux1P53564 AC154806.3-201ENSMUST00000227376 439 ntBASIC9.17□□□□□ -0.94
Cux1P53564 AC154806.4-201ENSMUST00000227406 439 ntBASIC9.17□□□□□ -0.94
Cux1P53564 AC118250.1-201ENSMUST00000228569 875 ntBASIC9.17□□□□□ -0.94
Cux1P53564 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC9.17□□□□□ -0.94
Cux1P53564 Gm37945-201ENSMUST00000192536 4367 ntBASIC9.17□□□□□ -0.94
Cux1P53564 Gm21781-201ENSMUST00000178920 4838 ntBASIC9.17□□□□□ -0.94
Cux1P53564 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cux1P53564 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cux1P53564 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cux1P53564 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC9.17□□□□□ -0.94
Cux1P53564 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cux1P53564 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cux1P53564 Gm6125-201ENSMUST00000217983 3472 ntBASIC9.17□□□□□ -0.94
Cux1P53564 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Cux1P53564 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cux1P53564 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cux1P53564 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cux1P53564 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cux1P53564 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cux1P53564 Gm14679-201ENSMUST00000121536 722 ntBASIC9.16□□□□□ -0.94
Cux1P53564 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cux1P53564 Gm5139-201ENSMUST00000175943 249 ntBASIC9.16□□□□□ -0.94
Cux1P53564 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC9.16□□□□□ -0.94
Cux1P53564 Gm18427-201ENSMUST00000195422 515 ntBASIC9.16□□□□□ -0.94
Cux1P53564 Glud-ps-201ENSMUST00000206310 657 ntBASIC9.16□□□□□ -0.94
Cux1P53564 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Cux1P53564 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC9.16□□□□□ -0.94
Cux1P53564 AC154417.1-201ENSMUST00000223876 476 ntBASIC9.16□□□□□ -0.94
Cux1P53564 AC124408.2-201ENSMUST00000228168 645 ntBASIC9.16□□□□□ -0.94
Cux1P53564 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cux1P53564 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Cux1P53564 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cux1P53564 Gm44043-201ENSMUST00000203426 3253 ntBASIC9.16□□□□□ -0.94
Cux1P53564 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cux1P53564 Gm18632-201ENSMUST00000222597 2087 ntBASIC9.16□□□□□ -0.94
Cux1P53564 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cux1P53564 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
Cux1P53564 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
Cux1P53564 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cux1P53564 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cux1P53564 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC9.15□□□□□ -0.94
Cux1P53564 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Cux1P53564 Gm23945-201ENSMUST00000179609 92 ntBASIC9.15□□□□□ -0.94
Cux1P53564 Gm22917-201ENSMUST00000180116 110 ntBASIC9.15□□□□□ -0.94
Cux1P53564 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC9.15□□□□□ -0.94
Cux1P53564 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC9.15□□□□□ -0.94
Cux1P53564 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms