Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox6P40645 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox6P40645 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Sox6P40645 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.66□□□□□ -1.5
Sox6P40645 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox6P40645 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Gm26289-201ENSMUST00000104169 131 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Gm12439-201ENSMUST00000117162 365 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.66□□□□□ -1.5
Sox6P40645 Gm14356-201ENSMUST00000118322 869 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Gm15765-201ENSMUST00000118407 910 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Gm8312-201ENSMUST00000119380 618 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.66□□□□□ -1.5
Sox6P40645 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 Gm21877-201ENSMUST00000185640 694 ntBASIC5.66□□□□□ -1.5
Sox6P40645 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.66□□□□□ -1.5
Sox6P40645 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.66□□□□□ -1.5
Sox6P40645 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Gm45448-201ENSMUST00000211739 209 ntBASIC5.66□□□□□ -1.5
Sox6P40645 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Gm3785-201ENSMUST00000221000 202 ntBASIC5.66□□□□□ -1.5
Sox6P40645 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.66□□□□□ -1.5
Sox6P40645 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.66□□□□□ -1.5
Sox6P40645 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.66□□□□□ -1.5
Sox6P40645 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox6P40645 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Sox6P40645 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Sox6P40645 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox6P40645 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sox6P40645 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sox6P40645 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.65□□□□□ -1.5
Sox6P40645 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox6P40645 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sox6P40645 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sox6P40645 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sox6P40645 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.65□□□□□ -1.5
Sox6P40645 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox6P40645 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sox6P40645 Gm9506-201ENSMUST00000118516 320 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Gm14018-201ENSMUST00000119042 455 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Gm15596-201ENSMUST00000121139 784 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Gm12451-201ENSMUST00000121636 633 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sox6P40645 Gm14747-201ENSMUST00000149888 984 ntBASIC5.65□□□□□ -1.5
Sox6P40645 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.65□□□□□ -1.5
Sox6P40645 Gm26353-201ENSMUST00000158224 255 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox6P40645 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox6P40645 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sox6P40645 Gm18700-201ENSMUST00000185791 553 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.65□□□□□ -1.5
Sox6P40645 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.65□□□□□ -1.5
Sox6P40645 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC5.65□□□□□ -1.5
Sox6P40645 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.65□□□□□ -1.5
Sox6P40645 Gm7557-201ENSMUST00000221935 865 ntBASIC5.65□□□□□ -1.5
Sox6P40645 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sox6P40645 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.65□□□□□ -1.5
Sox6P40645 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.65□□□□□ -1.5
Sox6P40645 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sox6P40645 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sox6P40645 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sox6P40645 Gm24032-201ENSMUST00000083932 159 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.65□□□□□ -1.5
Sox6P40645 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sox6P40645 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sox6P40645 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Sox6P40645 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sox6P40645 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Sox6P40645 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sox6P40645 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.65□□□□□ -1.51
Sox6P40645 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
Sox6P40645 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Sox6P40645 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.65□□□□□ -1.51
Sox6P40645 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Sox6P40645 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.51
Sox6P40645 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.65□□□□□ -1.51
Sox6P40645 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sox6P40645 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Sox6P40645 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Sox6P40645 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms