Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Traf1P39428 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Traf1P39428 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Traf1P39428 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Traf1P39428 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
Traf1P39428 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Mir700-201ENSMUST00000102169 79 ntBASIC7.15□□□□□ -1.26
Traf1P39428 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Gm25013-201ENSMUST00000158402 128 ntBASIC7.15□□□□□ -1.26
Traf1P39428 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC7.15□□□□□ -1.26
Traf1P39428 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Traf1P39428 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
Traf1P39428 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Traf1P39428 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC7.15□□□□□ -1.26
Traf1P39428 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC7.15□□□□□ -1.26
Traf1P39428 Gm24465-201ENSMUST00000178398 107 ntBASIC7.15□□□□□ -1.26
Traf1P39428 Gm27006-201ENSMUST00000182218 943 ntBASIC7.15□□□□□ -1.26
Traf1P39428 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC7.15□□□□□ -1.26
Traf1P39428 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Traf1P39428 Gm45734-201ENSMUST00000211916 411 ntBASIC7.15□□□□□ -1.26
Traf1P39428 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC7.15□□□□□ -1.26
Traf1P39428 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC7.15□□□□□ -1.26
Traf1P39428 AC154755.1-201ENSMUST00000225244 537 ntBASIC7.15□□□□□ -1.26
Traf1P39428 AC154527.1-201ENSMUST00000225809 242 ntBASIC7.15□□□□□ -1.26
Traf1P39428 AC136376.1-201ENSMUST00000228496 950 ntBASIC7.15□□□□□ -1.26
Traf1P39428 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Gm22300-201ENSMUST00000082661 126 ntBASIC7.15□□□□□ -1.26
Traf1P39428 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Traf1P39428 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.15□□□□□ -1.26
Traf1P39428 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
Traf1P39428 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC7.15□□□□□ -1.27
Traf1P39428 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.15□□□□□ -1.27
Traf1P39428 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Traf1P39428 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
Traf1P39428 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Traf1P39428 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Traf1P39428 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Traf1P39428 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Traf1P39428 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Traf1P39428 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.14□□□□□ -1.27
Traf1P39428 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Traf1P39428 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Traf1P39428 Gm7146-201ENSMUST00000116079 739 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Gm22710-201ENSMUST00000116892 125 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Traf1P39428 Gm5387-201ENSMUST00000119776 857 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Gm13899-201ENSMUST00000121519 1255 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Gm22276-201ENSMUST00000122469 129 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC7.14□□□□□ -1.27
Traf1P39428 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Traf1P39428 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Traf1P39428 Gm22518-201ENSMUST00000158267 68 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Gm3076-201ENSMUST00000161613 451 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC7.14□□□□□ -1.27
Traf1P39428 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Traf1P39428 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC7.14□□□□□ -1.27
Traf1P39428 Gm38097-201ENSMUST00000192936 439 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Gm21955-201ENSMUST00000194137 4968 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Gm37758-201ENSMUST00000194275 629 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Gm43561-201ENSMUST00000199866 448 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Gm19653-201ENSMUST00000204326 1039 ntBASIC7.14□□□□□ -1.27
Traf1P39428 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Traf1P39428 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Traf1P39428 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Traf1P39428 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.14□□□□□ -1.27
Traf1P39428 AC211878.5-201ENSMUST00000221697 409 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Traf1P39428 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Traf1P39428 Gm5612-201ENSMUST00000053326 375 ntBASIC7.14□□□□□ -1.27
Traf1P39428 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Traf1P39428 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.14□□□□□ -1.27
Traf1P39428 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.14□□□□□ -1.27
Traf1P39428 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Traf1P39428 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Traf1P39428 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Traf1P39428 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Traf1P39428 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC7.13□□□□□ -1.27
Traf1P39428 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC7.13□□□□□ -1.27
Traf1P39428 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Gm42544-201ENSMUST00000197868 3242 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.13□□□□□ -1.27
Traf1P39428 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Traf1P39428 Gm10062-201ENSMUST00000072180 1470 ntBASIC7.13□□□□□ -1.27
Traf1P39428 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms