Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col18a1P39061 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col18a1P39061 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col18a1P39061 Gm37132-201ENSMUST00000195553 2238 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col18a1P39061 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col18a1P39061 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col18a1P39061 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
Col18a1P39061 Gm25537-201ENSMUST00000103851 109 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 Gm20545-201ENSMUST00000174739 210 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 Mir7687-201ENSMUST00000184722 59 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 Gm21139-201ENSMUST00000186594 877 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 Igkv15-101-201ENSMUST00000195917 299 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC8.15□□□□□ -1.1
Col18a1P39061 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC8.15□□□□□ -1.1
Col18a1P39061 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC8.15□□□□□ -1.1
Col18a1P39061 AC162934.3-201ENSMUST00000223015 841 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 AL807824.1-201ENSMUST00000223151 183 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col18a1P39061 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Col18a1P39061 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col18a1P39061 Gm5844-201ENSMUST00000119417 2191 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col18a1P39061 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col18a1P39061 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col18a1P39061 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col18a1P39061 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col18a1P39061 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col18a1P39061 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col18a1P39061 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col18a1P39061 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Col18a1P39061 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC8.15□□□□□ -1.1
Col18a1P39061 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col18a1P39061 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Col18a1P39061 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col18a1P39061 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col18a1P39061 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col18a1P39061 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC8.15□□□□□ -1.11
Col18a1P39061 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Col18a1P39061 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Col18a1P39061 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col18a1P39061 Gm19093-201ENSMUST00000210671 1454 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Gm9930-201ENSMUST00000066742 3151 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Col18a1P39061 Gm11908-201ENSMUST00000117755 347 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Gm15741-201ENSMUST00000119401 754 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Gm8051-201ENSMUST00000120464 466 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC8.15□□□□□ -1.11
Col18a1P39061 Gm25271-201ENSMUST00000157273 290 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Gm23553-201ENSMUST00000157817 295 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Gm3216-201ENSMUST00000166927 486 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Gm3141-201ENSMUST00000168726 499 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Gm28973-201ENSMUST00000189310 613 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Gm37511-201ENSMUST00000192901 294 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Gm44237-201ENSMUST00000205183 936 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Col18a1P39061 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC8.15□□□□□ -1.11
Col18a1P39061 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Col18a1P39061 n-R5s161-201ENSMUST00000083728 114 ntBASIC8.15□□□□□ -1.11
Col18a1P39061 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col18a1P39061 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Col18a1P39061 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col18a1P39061 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC8.14□□□□□ -1.11
Col18a1P39061 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Col18a1P39061 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Col18a1P39061 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC8.14□□□□□ -1.11
Col18a1P39061 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC8.14□□□□□ -1.11
Col18a1P39061 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.14□□□□□ -1.11
Col18a1P39061 Gm37653-201ENSMUST00000195401 3578 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Col18a1P39061 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col18a1P39061 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col18a1P39061 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC8.14□□□□□ -1.11
Col18a1P39061 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Col18a1P39061 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col18a1P39061 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Col18a1P39061 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col18a1P39061 Gm13193-201ENSMUST00000117275 225 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Col18a1P39061 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col18a1P39061 Gm15227-201ENSMUST00000121844 399 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC8.14□□□□□ -1.11
Col18a1P39061 Gm20674-201ENSMUST00000177452 369 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 Gm5430-201ENSMUST00000182525 915 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 Gm5066-201ENSMUST00000188479 822 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 Gm29551-201ENSMUST00000190913 698 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Col18a1P39061 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC8.14□□□□□ -1.11
Col18a1P39061 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC8.14□□□□□ -1.11
Col18a1P39061 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC8.14□□□□□ -1.11
Col18a1P39061 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC8.14□□□□□ -1.11
Col18a1P39061 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms