Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm29141-201ENSMUST00000190357 882 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm28837-201ENSMUST00000190397 696 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm28531-201ENSMUST00000190529 696 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm28165-201ENSMUST00000190669 694 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm29181-201ENSMUST00000191288 696 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm32347-201ENSMUST00000192944 696 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm37990-201ENSMUST00000195821 696 ntBASIC6.39□□□□□ -1.39
LdlrP35951 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm5711-201ENSMUST00000197896 421 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.39□□□□□ -1.39
LdlrP35951 Gm9023-201ENSMUST00000198408 1038 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm43762-201ENSMUST00000201521 295 ntBASIC6.39□□□□□ -1.39
LdlrP35951 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
LdlrP35951 Gm18838-201ENSMUST00000204855 886 ntBASIC6.39□□□□□ -1.39
LdlrP35951 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LdlrP35951 Gm44688-201ENSMUST00000209083 537 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
LdlrP35951 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LdlrP35951 Gm19572-201ENSMUST00000214326 338 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LdlrP35951 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.39□□□□□ -1.39
LdlrP35951 Gm18628-201ENSMUST00000220584 475 ntBASIC6.39□□□□□ -1.39
LdlrP35951 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.39□□□□□ -1.39
LdlrP35951 AC124569.4-201ENSMUST00000223830 1220 ntBASIC6.39□□□□□ -1.39
LdlrP35951 AC134864.1-201ENSMUST00000226326 511 ntBASIC6.39□□□□□ -1.39
LdlrP35951 AC108945.1-201ENSMUST00000226477 94 ntBASIC6.39□□□□□ -1.39
LdlrP35951 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LdlrP35951 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
LdlrP35951 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LdlrP35951 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
LdlrP35951 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Gm43178-201ENSMUST00000197257 1386 ntBASIC6.39□□□□□ -1.39
LdlrP35951 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LdlrP35951 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.39□□□□□ -1.39
LdlrP35951 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.39□□□□□ -1.39
LdlrP35951 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
LdlrP35951 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LdlrP35951 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
LdlrP35951 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
LdlrP35951 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.39□□□□□ -1.39
LdlrP35951 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.39□□□□□ -1.39
LdlrP35951 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
LdlrP35951 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
LdlrP35951 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
LdlrP35951 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LdlrP35951 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
LdlrP35951 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LdlrP35951 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
LdlrP35951 Gm11799-201ENSMUST00000116110 460 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Gm15149-201ENSMUST00000119370 360 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Gm13338-201ENSMUST00000120235 361 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Gm14925-201ENSMUST00000120611 438 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.38□□□□□ -1.39
LdlrP35951 Gm5125-201ENSMUST00000148614 624 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Gm4997-201ENSMUST00000154056 360 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LdlrP35951 Gm9064-201ENSMUST00000163579 566 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
LdlrP35951 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.38□□□□□ -1.39
LdlrP35951 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
LdlrP35951 Gm20454-201ENSMUST00000172713 221 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Gm20432-201ENSMUST00000173716 250 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Gm23810-201ENSMUST00000175150 74 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LdlrP35951 Gm17895-201ENSMUST00000194028 874 ntBASIC6.38□□□□□ -1.39
LdlrP35951 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Gm18012-201ENSMUST00000204558 773 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Gm44538-201ENSMUST00000205615 348 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.38□□□□□ -1.39
LdlrP35951 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Gm7368-201ENSMUST00000213307 367 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.38□□□□□ -1.39
LdlrP35951 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.38□□□□□ -1.39
LdlrP35951 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LdlrP35951 Gm18040-201ENSMUST00000217922 827 ntBASIC6.38□□□□□ -1.39
LdlrP35951 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.38□□□□□ -1.39
LdlrP35951 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.38□□□□□ -1.39
LdlrP35951 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.38□□□□□ -1.39
LdlrP35951 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.38□□□□□ -1.39
LdlrP35951 Gm24035-201ENSMUST00000082867 107 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms