Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC4.84□□□□□ -1.63
Sdc1P18828 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm25281-201ENSMUST00000157270 104 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm23069-201ENSMUST00000158240 311 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm16113-201ENSMUST00000159629 372 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm8893-201ENSMUST00000172146 1242 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm27853-201ENSMUST00000184176 250 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Mir6919-201ENSMUST00000185146 62 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm18799-201ENSMUST00000189104 913 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm28846-201ENSMUST00000189161 368 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm29605-201ENSMUST00000190800 292 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm44342-201ENSMUST00000196874 129 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm44319-201ENSMUST00000196974 93 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm44383-201ENSMUST00000198940 129 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm43812-202ENSMUST00000202701 581 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm5306-201ENSMUST00000203325 757 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm44431-201ENSMUST00000203500 413 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC4.84□□□□□ -1.63
Sdc1P18828 Gm18205-201ENSMUST00000209215 841 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC4.84□□□□□ -1.63
Sdc1P18828 AC160112.1-201ENSMUST00000219139 714 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 AC132260.1-201ENSMUST00000225499 734 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 AV026068-237ENSMUST00000226075 572 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 AC158750.1-201ENSMUST00000226163 634 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 AC140451.1-201ENSMUST00000227984 737 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 n-R5s169-201ENSMUST00000083110 120 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sdc1P18828 AC121942.1-201ENSMUST00000224459 2891 ntBASIC4.84□□□□□ -1.63
Sdc1P18828 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC4.84□□□□□ -1.63
Sdc1P18828 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sdc1P18828 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.64
Sdc1P18828 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Sdc1P18828 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sdc1P18828 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sdc1P18828 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sdc1P18828 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm37595-201ENSMUST00000192668 1742 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sdc1P18828 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 AC156025.2-201ENSMUST00000225907 1533 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm45183-201ENSMUST00000207937 1497 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 AC140393.3-201ENSMUST00000228396 1352 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Mir466i-201ENSMUST00000116924 121 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm2199-201ENSMUST00000119065 874 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm12331-201ENSMUST00000119927 622 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm14065-201ENSMUST00000120848 585 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm25455-201ENSMUST00000157946 325 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm22948-201ENSMUST00000158561 243 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm25048-201ENSMUST00000158598 91 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm22116-201ENSMUST00000158791 141 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC4.83□□□□□ -1.64
Sdc1P18828 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm27782-201ENSMUST00000185059 199 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm21139-201ENSMUST00000186594 877 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm29156-201ENSMUST00000187764 499 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm29214-201ENSMUST00000190216 570 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm29141-201ENSMUST00000190357 882 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm37285-201ENSMUST00000194465 1139 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm43779-201ENSMUST00000196691 829 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm19088-201ENSMUST00000198800 566 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm17822-201ENSMUST00000204307 351 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm7972-201ENSMUST00000208434 1137 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm9604-201ENSMUST00000211175 433 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC4.83□□□□□ -1.64
Sdc1P18828 AC159246.1-201ENSMUST00000214478 249 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm4042-201ENSMUST00000216946 637 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 AC105169.1-201ENSMUST00000218912 1294 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 Gm4012-201ENSMUST00000221504 581 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC4.83□□□□□ -1.64
Sdc1P18828 AC105950.1-201ENSMUST00000222637 408 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 CT030645.2-201ENSMUST00000224321 1012 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 AC159205.1-201ENSMUST00000225513 1099 ntBASIC4.83□□□□□ -1.64
Sdc1P18828 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sdc1P18828 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sdc1P18828 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Sdc1P18828 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sdc1P18828 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms