Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm11617-201ENSMUST00000119609 639 ntBASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm29519-201ENSMUST00000186994 398 ntBASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm2614-201ENSMUST00000223227 403 ntBASIC6.54□□□□□ -1.36
Chmp6P0C0A3 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Chmp6P0C0A3 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm11902-201ENSMUST00000118849 270 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm15781-201ENSMUST00000120216 323 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm12618-201ENSMUST00000121754 483 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm24733-201ENSMUST00000158863 253 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm3242-201ENSMUST00000171273 485 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Mir6244-201ENSMUST00000184156 117 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm28934-201ENSMUST00000186491 346 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm28080-201ENSMUST00000188552 722 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm21524-201ENSMUST00000190499 696 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm21715-201ENSMUST00000191056 694 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm37758-201ENSMUST00000194275 629 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm8256-203ENSMUST00000228692 591 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.53□□□□□ -1.36
Chmp6P0C0A3 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.52□□□□□ -1.36
Chmp6P0C0A3 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Chmp6P0C0A3 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Chmp6P0C0A3 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Chmp6P0C0A3 Naip3-201ENSMUST00000118082 4208 ntBASIC6.52□□□□□ -1.36
Chmp6P0C0A3 Gm9519-201ENSMUST00000206108 1337 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm12643-201ENSMUST00000116078 374 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm23553-201ENSMUST00000157817 295 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm23896-201ENSMUST00000158109 130 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm17137-202ENSMUST00000165729 957 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm27512-201ENSMUST00000175328 126 ntBASIC6.52□□□□□ -1.37
Chmp6P0C0A3 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Chmp6P0C0A3 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms