Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxa9P09631 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.2□□□□□ -1.42
Hoxa9P09631 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxa9P09631 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxa9P09631 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxa9P09631 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Hoxa9P09631 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxa9P09631 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm14356-201ENSMUST00000118322 869 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm14294-201ENSMUST00000119749 751 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm15786-201ENSMUST00000121079 450 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.19□□□□□ -1.42
Hoxa9P09631 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm6541-201ENSMUST00000165542 561 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Mir7037-201ENSMUST00000184414 65 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm43561-201ENSMUST00000199866 448 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm5990-201ENSMUST00000203126 746 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.19□□□□□ -1.42
Hoxa9P09631 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm46223-201ENSMUST00000215196 675 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxa9P09631 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hoxa9P09631 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxa9P09631 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.19□□□□□ -1.42
Hoxa9P09631 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxa9P09631 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxa9P09631 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxa9P09631 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxa9P09631 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxa9P09631 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxa9P09631 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxa9P09631 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm12654-201ENSMUST00000120387 587 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm12396-201ENSMUST00000121600 306 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm23757-201ENSMUST00000158353 100 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm23050-201ENSMUST00000158775 165 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm16139-201ENSMUST00000160015 420 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm18199-201ENSMUST00000173820 835 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm26057-201ENSMUST00000178099 165 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Mir6992-201ENSMUST00000183342 109 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm37517-201ENSMUST00000194004 1289 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm44221-201ENSMUST00000203552 388 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm43945-201ENSMUST00000203595 754 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm18628-201ENSMUST00000220584 475 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 Gm18601-201ENSMUST00000220831 634 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.18□□□□□ -1.42
Hoxa9P09631 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms