Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm22660-201ENSMUST00000104193 130 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm14385-201ENSMUST00000116315 876 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm11878-201ENSMUST00000117908 400 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm11348-201ENSMUST00000118813 318 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm15113-201ENSMUST00000119280 836 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm12611-201ENSMUST00000119452 1037 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm12638-201ENSMUST00000119531 298 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm14972-201ENSMUST00000121780 364 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm22073-201ENSMUST00000122668 189 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC6.13□□□□□ -1.43
Hoxd3P09027 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm24729-201ENSMUST00000158225 137 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm24883-201ENSMUST00000158391 281 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm6264-202ENSMUST00000162896 1217 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Traj54-201ENSMUST00000165071 54 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm22951-201ENSMUST00000179471 107 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Mir6972-201ENSMUST00000184774 64 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm17946-201ENSMUST00000186856 538 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm17867-201ENSMUST00000188981 391 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm20932-201ENSMUST00000189115 694 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm28864-201ENSMUST00000189251 644 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm43546-201ENSMUST00000196721 943 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm6522-201ENSMUST00000197160 1203 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm43840-201ENSMUST00000199444 484 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm43825-201ENSMUST00000199650 734 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm42713-201ENSMUST00000202709 945 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm45136-201ENSMUST00000205793 943 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm5322-201ENSMUST00000206142 699 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm4898-201ENSMUST00000218519 832 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.13□□□□□ -1.43
Hoxd3P09027 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 AC122448.1-201ENSMUST00000226317 772 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hoxd3P09027 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm44752-201ENSMUST00000207140 3305 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hoxd3P09027 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Zfp939-201ENSMUST00000061201 2131 ntBASIC6.13□□□□□ -1.43
Hoxd3P09027 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hoxd3P09027 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm42981-201ENSMUST00000200184 3252 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 AC158605.4-201ENSMUST00000219013 3361 ntBASIC6.12□□□□□ -1.43
Hoxd3P09027 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxd3P09027 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Hoxd3P09027 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms