Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm7042-201ENSMUST00000223027 384 ntBASIC6.2□□□□□ -1.42
Col4a6B1AVK5 Gm6474-201ENSMUST00000223250 699 ntBASIC6.2□□□□□ -1.42
Col4a6B1AVK5 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.2□□□□□ -1.42
Col4a6B1AVK5 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col4a6B1AVK5 Gm22807-201ENSMUST00000082737 129 ntBASIC6.2□□□□□ -1.42
Col4a6B1AVK5 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col4a6B1AVK5 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col4a6B1AVK5 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm14352-201ENSMUST00000119250 449 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm15186-201ENSMUST00000119345 563 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm17511-201ENSMUST00000172206 342 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Mir5103-201ENSMUST00000175111 79 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm37838-201ENSMUST00000194464 312 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm7733-201ENSMUST00000199038 919 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm44132-201ENSMUST00000205142 151 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Gm5436-201ENSMUST00000058103 643 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col4a6B1AVK5 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm25758-201ENSMUST00000103987 129 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm8595-201ENSMUST00000118250 630 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm37436-201ENSMUST00000193842 1085 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm9238-201ENSMUST00000196181 329 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm18587-201ENSMUST00000213736 841 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col4a6B1AVK5 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms