Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5538W4VSP6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5538W4VSP6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm5538W4VSP6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5538W4VSP6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5538W4VSP6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5538W4VSP6 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.37■□□□□ 0.53
Gm5538W4VSP6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5538W4VSP6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Gm5538W4VSP6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5538W4VSP6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5538W4VSP6 Gm38285-201ENSMUST00000192928 922 ntBASIC18.37■□□□□ 0.53
Gm5538W4VSP6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5538W4VSP6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.37■□□□□ 0.53
Gm5538W4VSP6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5538W4VSP6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5538W4VSP6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5538W4VSP6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Gm12896-201ENSMUST00000118430 226 ntBASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Mtag2-201ENSMUST00000058665 714 ntBASIC18.36■□□□□ 0.53
Gm5538W4VSP6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Zfp783-201ENSMUST00000095946 670 ntBASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5538W4VSP6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Gm11927-201ENSMUST00000118472 759 ntBASIC18.35■□□□□ 0.53
Gm5538W4VSP6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Gm27275-201ENSMUST00000184318 272 ntBASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5538W4VSP6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Dio3-201ENSMUST00000097228 1449 ntBASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Gm12527-201ENSMUST00000117967 564 ntBASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.34■□□□□ 0.53
Gm5538W4VSP6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5538W4VSP6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5538W4VSP6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5538W4VSP6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5538W4VSP6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5538W4VSP6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Gm5538W4VSP6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5538W4VSP6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.33■□□□□ 0.52
Gm5538W4VSP6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5538W4VSP6 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.33■□□□□ 0.52
Gm5538W4VSP6 Gm12441-201ENSMUST00000121806 588 ntBASIC18.33■□□□□ 0.52
Gm5538W4VSP6 Gm2559-201ENSMUST00000201323 363 ntBASIC18.33■□□□□ 0.52
Gm5538W4VSP6 Gm20049-201ENSMUST00000219950 730 ntBASIC18.33■□□□□ 0.52
Gm5538W4VSP6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5538W4VSP6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5538W4VSP6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Gm5538W4VSP6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5538W4VSP6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5538W4VSP6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5538W4VSP6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5538W4VSP6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5538W4VSP6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5538W4VSP6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm5538W4VSP6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Gm5538W4VSP6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Gm5538W4VSP6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5538W4VSP6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5538W4VSP6 Flg-201ENSMUST00000050758 1488 ntBASIC18.32■□□□□ 0.52
Gm5538W4VSP6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms