Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1S4R1E0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1S4R1E0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1S4R1E0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb1S4R1E0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
H2afb1S4R1E0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Gm13146-201ENSMUST00000118508 780 ntBASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
H2afb1S4R1E0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
H2afb1S4R1E0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Gm13234-201ENSMUST00000120010 747 ntBASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2afb1S4R1E0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2afb1S4R1E0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
H2afb1S4R1E0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms