Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Hmg20bQ9Z104 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.24■□□□□ 0.99
Hmg20bQ9Z104 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
Hmg20bQ9Z104 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmg20bQ9Z104 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmg20bQ9Z104 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Hmg20bQ9Z104 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.22■□□□□ 0.99
Hmg20bQ9Z104 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmg20bQ9Z104 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hmg20bQ9Z104 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmg20bQ9Z104 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Hmg20bQ9Z104 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmg20bQ9Z104 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Hmg20bQ9Z104 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hmg20bQ9Z104 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmg20bQ9Z104 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hmg20bQ9Z104 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmg20bQ9Z104 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Hmg20bQ9Z104 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmg20bQ9Z104 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hmg20bQ9Z104 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Hmg20bQ9Z104 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.2■□□□□ 0.99
Hmg20bQ9Z104 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hmg20bQ9Z104 Rarb-207ENSMUST00000225921 2756 ntBASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Gm4968-201ENSMUST00000071458 858 ntBASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmg20bQ9Z104 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Gm11927-201ENSMUST00000118472 759 ntBASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Gm2559-201ENSMUST00000201323 363 ntBASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmg20bQ9Z104 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.17■□□□□ 0.98
Hmg20bQ9Z104 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms