Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Cx3cr1Q9Z0D9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cx3cr1Q9Z0D9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cx3cr1Q9Z0D9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cx3cr1Q9Z0D9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Mir7075-201ENSMUST00000184187 82 ntBASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Gm38205-201ENSMUST00000192243 258 ntBASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cx3cr1Q9Z0D9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.22■□□□□ 0.03
Cx3cr1Q9Z0D9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms